ENST00000508461.5 SMG7

Information
Transcript ID
ENST00000508461.5
Genome
hg38
Position
chr1:183,472,500-183,552,263
Strand
+
CDS length
3,438
Amino acid length
1,146
Gene symbol
SMG7
Gene type
protein-coding
Gene description
SMG7 nonsense mediated mRNA decay factor
Gene Entrez Gene ID
9887
Variants

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Target data :
MGeND data only
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Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
Search Word
Target data :
MGeND data only
Category :
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Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Search Word
Target data :
MGeND data only
Category :
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Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
1 183,472,500 183,472,649
2 183,515,874 183,515,991
3 183,517,688 183,517,820
4 183,526,596 183,526,767
5 183,527,956 183,528,027
6 183,528,892 183,529,042
7 183,529,398 183,529,533
8 183,533,164 183,533,326
9 183,533,676 183,533,832
10 183,537,145 183,537,215
11 183,538,380 183,538,440
12 183,540,984 183,541,103
13 183,542,076 183,542,502
14 183,544,353 183,544,497
15 183,544,930 183,545,312
16 183,545,966 183,546,337
17 183,547,103 183,547,252
18 183,549,208 183,549,288
19 183,549,764 183,549,923
20 183,550,751 183,550,921
21 183,551,045 183,551,190
22 183,551,818 183,552,263
CDS
Exon number Type Start Stop
2 CDS 183,515,939 183,515,991
3 CDS 183,517,688 183,517,820
4 CDS 183,526,596 183,526,767
5 CDS 183,527,956 183,528,027
6 CDS 183,528,892 183,529,042
7 CDS 183,529,398 183,529,533
8 CDS 183,533,164 183,533,326
9 CDS 183,533,676 183,533,832
10 CDS 183,537,145 183,537,215
11 CDS 183,538,380 183,538,440
12 CDS 183,540,984 183,541,103
13 CDS 183,542,076 183,542,502
14 CDS 183,544,353 183,544,497
15 CDS 183,544,930 183,545,312
16 CDS 183,545,966 183,546,337
17 CDS 183,547,103 183,547,252
18 CDS 183,549,208 183,549,288
19 CDS 183,549,764 183,549,923
20 CDS 183,550,751 183,550,921
21 CDS 183,551,045 183,551,190
22 CDS 183,551,818 183,551,931
Other genome
Genome Chromosome Start End Links
hg19 chr1 183,441,635 183,521,398 Link
CDS sequence
ATGCTAGTTACCGATTTGGAATACGCTTTAGACAAGAAAGTAGAACAGGATCTCTGGAATCACGCCTTTAAGAATCAGATCACAACACTGCAAGGCCAGGCAAAGAATCGAGCAAATCCGAATCGGAGTGAAGTTCAGGCAAACCTTTCTCTGTTCCTAGAGGCAGCTAGTGGCTTCTATACTCAGTTATTACAAGAACTGTGTACAGTATTTAATGTAGATTTACCATGCCGTGTGAAGTCTTCCCAATTGGGAATTATCAGCAATAAACAGACGCATACCAGCGCCATAGTGAAGCCACAGTCTAGCTCCTGTTCCTATATCTGCCAGCACTGCCTCGTCCACCTTGGAGACATTGCTCGATACAGAAACCAGACCAGCCAGGCAGAGTCCTACTATAGGCATGCAGCTCAGCTTGTCCCCTCCAATGGTCAGCCTTATAATCAGTTGGCTATCTTAGCTTCTTCCAAAGGAGACCATCTGACCACAATTTTCTACTACTGCAGAAGCATTGCTGTGAAGTTCCCTTTCCCAGCTGCCTCCACTAATCTGCAAAAAGCACTTTCTAAAGCACTGGAAAGCCGAGATGAGGTGAAAACCAAGTGGGGTGTTTCTGACTTCATCAAGGCCTTTATTAAATTCCACGGTCATGTGTACCTGAGTAAGAGCTTGGAAAAGTTGAGCCCTCTTCGAGAGAAATTGGAAGAACAGTTTAAGAGGCTGCTATTCCAAAAAGCTTTCAACTCTCAGCAGTTAGTTCATGTCACTGTCATTAACCTGTTTCAACTTCATCACCTTCGTGACTTTAGCAATGAAACCGAGCAGCACACTTATAGCCAAGATGAGCAGCTATGTTGGACACAGTTGCTGGCCCTCTTTATGTCTTTTCTTGGCATCCTGTGCAAGTGTCCTCTACAGAATGAGTCTCAGGAGGAGTCCTACAATGCCTATCCTCTTCCAGCAGTCAAGGTCTCCATGGACTGGCTAAGACTCAGACCCAGGGTCTTTCAGGAGGCAGTGGTGGATGAAAGACAGTACATTTGGCCCTGGTTGATTTCTCTTCTGAATAGTTTCCATCCCCATGAAGAGGACCTCTCAAGTATTAGTGCGACACCACTTCCAGAGGAGTTTGAATTACAAGGATTTTTGGCATTGAGACCTTCTTTCAGGAACTTGGATTTTTCCAAAGGTCACCAGGGTATTACAGGGGACAAAGAAGGCCAGCAACGACGAATACGACAGCAACGCTTGATCTCTATAGGCAAATGGATTGCTGATAATCAGCCAAGGCTGATTCAGTGTGAAAATGAGGTAGGGAAATTGTTGTTTATCACAGAAATCCCAGAATTAATACTGGAAGACCCCAGTGAAGCCAAAGAGAACCTCATTCTGCAAGAAACATCTGTGATAGAGTCGCTGGCTGCAGATGGGAGCCCAGGGCTAAAATCAGTGCTATCTACAAGCCGAAATTTAAGCAACAACTGTGACACAGGAGAGAAGCCAGTGGTTACCTTCAAAGAAAACATTAAGACACGAGAAGTGAACAGAGACCAAGGAAGAAGTTTTCCTCCCAAAGAGGTGAGAAGGGACTATAGCAAAGGAATAACTGTAACTAAGAATGATGGAAAGAAGGACAACAACAAGAGGAAAACTGAAACCAAGAAATGCACCTTAGAAAAGTTACAGGAAACAGGAAAGCAGAATGTGGCAGTGCAGGTAAAATCCCAGACAGAACTAAGAAAGACTCCAGTGTCTGAAGCCAGAAAAACACCTGTAACTCAAACCCCAACTCAAGCAAGTAACTCCCAGTTCATCCCCATTCATCACCCTGGAGCCTTCCCTCCTCTTCCCAGCAGGCCAGGGTTTCCGCCCCCAACATATGTTATCCCCCCGCCTGTGGCATTTTCTATGGGCTCAGGTTACACCTTCCCAGCTGGTGTTTCTGTCCCAGGAACCTTTCTTCAGCCTACAGCTCACTCTCCAGCAGGAAACCAGGTGCAAGCTGGGAAACAGTCCCACATTCCTTACAGCCAGCAACGGCCCTCTGGACCAGGGCCAATGAACCAGGGACCTCAACAATCACAGCCACCTTCCCAGCAACCCCTTACATCTTTACCAGCTCAGCCAACAGCACAGTCTACAAGCCAGCTGCAGGTTCAAGCTCTAACTCAGCAACAACAATCCCCTACAAAAGCTGTGCCGGCTTTGGGGAAAAGCCCGCCTCACCACTCTGGATTCCAGCAGTATCAACAGGCAGATGCCTCCAAACAGCTGTGGAATCCCCCTCAGGTTCAAGGCCCATTAGGGAAAATTATGCCTGTGAAACAGCCCTACTACCTTCAGACCCAAGACCCCATAAAACTGTTTGAGCCGTCATTGCAACCTCCTGTAATGCAGCAGCAGCCTCTAGAAAAAAAAATGAAGCCTTTTCCCATGGAGCCATATAACCATAATCCCTCAGAAGTCAAGGTCCCAGAATTCTACTGGGATTCTTCCTACAGCATGGCTGATAACAGATCTGTAATGGCACAGCAAGCAAACATAGACCGCAGGGGCAAACGGTCACCAGGAGTCTTCCGTCCAGAGCAGGATCCTGTACCCAGAATGCCGTTTGAGGACCCCAAGAGCTCCCCTCTGCTTCCTCCGGACCTGTTAAAGAGTCTGGCTGCCTTGGAGGAAGAGGAAGAGCTGATTTTTTCTAACCCTCCTGATCTTTACCCGGCTCTGCTGGGGCCTCTCGCCTCTCTTCCTGGACGAAGCCTTTTTAAATCCTTATTGGAGAAGCCCTCAGAGCTCATGTCACATTCATCCTCTTTCCTGTCCCTCACCGGATTCTCTCTCAATCAGGAAAGATACCCAAATAATAGTATGTTCAATGAGGTATATGGGAAAAACCTGACATCCAGCTCCAAAGCAGAACTCAGTCCCTCAATGGCCCCCCAGGAAACATCTCTGTATTCCCTTTTTGAAGGGACTCCGTGGTCTCCATCACTTCCTGCCAGTTCAGATCATTCAACACCAGCCAGCCAGTCTCCTCATTCCTCTAACCCAAGCAGCCTACCCAGCTCTCCTCCAACACACAACCATAATTCTGTTCCATTCTCCAATTTTGGACCCATTGGGACTCCAGATAACAGGGATAGAAGGACTGCAGATCGGTGGAAAACTGATAAGCCAGCCATGGGTGGGTTTGGCATTGATTATCTCTCAGCAACGTCATCCTCTGAGAGCAGTTGGCATCAGGCCAGCACTCCGAGTGGCACCTGGACAGGCCATGGCCCTTCCATGGAGGATTCCTCTGCTGTCCTCATGGAAAGCCTAAAGTCTATCTGGTCCAGTTCCATGATGCATCCTGGACCTTCTGCTCTGGAGCAGCTGTTAATGCAGCAGAAGCAGAAACAGCAACGGGGACAAGGCACCATGAACCCTCCACACTGA
Amino sequence
MLVTDLEYALDKKVEQDLWNHAFKNQITTLQGQAKNRANPNRSEVQANLSLFLEAASGFYTQLLQELCTVFNVDLPCRVKSSQLGIISNKQTHTSAIVKPQSSSCSYICQHCLVHLGDIARYRNQTSQAESYYRHAAQLVPSNGQPYNQLAILASSKGDHLTTIFYYCRSIAVKFPFPAASTNLQKALSKALESRDEVKTKWGVSDFIKAFIKFHGHVYLSKSLEKLSPLREKLEEQFKRLLFQKAFNSQQLVHVTVINLFQLHHLRDFSNETEQHTYSQDEQLCWTQLLALFMSFLGILCKCPLQNESQEESYNAYPLPAVKVSMDWLRLRPRVFQEAVVDERQYIWPWLISLLNSFHPHEEDLSSISATPLPEEFELQGFLALRPSFRNLDFSKGHQGITGDKEGQQRRIRQQRLISIGKWIADNQPRLIQCENEVGKLLFITEIPELILEDPSEAKENLILQETSVIESLAADGSPGLKSVLSTSRNLSNNCDTGEKPVVTFKENIKTREVNRDQGRSFPPKEVRRDYSKGITVTKNDGKKDNNKRKTETKKCTLEKLQETGKQNVAVQVKSQTELRKTPVSEARKTPVTQTPTQASNSQFIPIHHPGAFPPLPSRPGFPPPTYVIPPPVAFSMGSGYTFPAGVSVPGTFLQPTAHSPAGNQVQAGKQSHIPYSQQRPSGPGPMNQGPQQSQPPSQQPLTSLPAQPTAQSTSQLQVQALTQQQQSPTKAVPALGKSPPHHSGFQQYQQADASKQLWNPPQVQGPLGKIMPVKQPYYLQTQDPIKLFEPSLQPPVMQQQPLEKKMKPFPMEPYNHNPSEVKVPEFYWDSSYSMADNRSVMAQQANIDRRGKRSPGVFRPEQDPVPRMPFEDPKSSPLLPPDLLKSLAALEEEEELIFSNPPDLYPALLGPLASLPGRSLFKSLLEKPSELMSHSSSFLSLTGFSLNQERYPNNSMFNEVYGKNLTSSSKAELSPSMAPQETSLYSLFEGTPWSPSLPASSDHSTPASQSPHSSNPSSLPSSPPTHNHNSVPFSNFGPIGTPDNRDRRTADRWKTDKPAMGGFGIDYLSATSSSESSWHQASTPSGTWTGHGPSMEDSSAVLMESLKSIWSSSMMHPGPSALEQLLMQQKQKQQRGQGTMNPPH*