ENST00000600733.5 SHKBP1

Information
Transcript ID
ENST00000600733.5
Genome
hg38
Position
chr19:40,576,855-40,591,397
Strand
+
CDS length
2,049
Amino acid length
683
Gene symbol
SHKBP1
Gene type
protein-coding
Gene description
SH3KBP1 binding protein 1
Gene Entrez Gene ID
92799
Variants

Display target variant


Search Word
Target data :
MGeND data only
Category :
Search word :
Filtering :
Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
Search Word
Target data :
MGeND data only
Category :
Search word :
Filtering :
Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Search Word
Target data :
MGeND data only
Category :
Search word :
Filtering :
Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
1 40,576,855 40,576,985
2 40,577,231 40,577,284
3 40,577,396 40,577,441
4 40,577,557 40,577,630
5 40,578,154 40,578,212
6 40,578,462 40,578,542
7 40,580,324 40,580,485
8 40,580,566 40,580,656
9 40,580,746 40,580,936
10 40,582,426 40,582,466
11 40,583,398 40,583,485
12 40,583,601 40,583,717
13 40,586,774 40,586,944
14 40,588,624 40,588,779
15 40,589,082 40,589,178
16 40,590,244 40,590,422
17 40,590,730 40,590,853
18 40,590,976 40,591,397
CDS
Exon number Type Start Stop
1 CDS 40,576,900 40,576,985
2 CDS 40,577,231 40,577,284
3 CDS 40,577,396 40,577,441
4 CDS 40,577,557 40,577,630
5 CDS 40,578,154 40,578,212
6 CDS 40,578,462 40,578,542
7 CDS 40,580,324 40,580,485
8 CDS 40,580,566 40,580,656
9 CDS 40,580,746 40,580,936
10 CDS 40,582,426 40,582,466
11 CDS 40,583,398 40,583,485
12 CDS 40,583,601 40,583,717
13 CDS 40,586,774 40,586,944
14 CDS 40,588,624 40,588,779
15 CDS 40,589,082 40,589,178
16 CDS 40,590,244 40,590,422
17 CDS 40,590,730 40,590,853
18 CDS 40,590,976 40,591,207
Other genome
Genome Chromosome Start End Links
hg19 chr19 41,082,761 41,097,303 Link
CDS sequence
ATGGCAGCAGCGGCTACTGCAGCCGAGGGGGTCCCCAGTCGGGGGCCTCCCGGGGAAGTCATTCATCTGAATGTGGGAGGCAAGAGATTCAGTACCTCTCGCCAGACTCTCACCTGGATCCCAGACTCCTTCTTCTCCAGTCTTCTGAGCGGACGCATCTCGACGCTGAAAGATGAGACCGGAGCAATCTTCATCGACAGGGACCCTACAGTCTTCGCCCCCATCCTCAACTTCCTGCGCACCAAAGAGTTGGATCCCAGGGGTGTCCACGGTTCCAGCCTCCTCCATGAAGCCCAGTTCTATGGGCTCACTCCTCTGGTTCGTCGCCTGCAGCTTCGAGAGGAGTTGGATCGATCTTCTTGTGGAAACGTCCTCTTCAATGGTTACCTGCCGCCACCAGTGTTCCCAGTGAAGCGGCGGAACCGGCACAGCCTAGTGGGGCCTCAGCAGCTAGGAGGACGGCCAGCCCCTGTCCGACGGAGCAACACGATGCCCCCCAACCTTGGCAATGCAGGGCTGCTGGGCCGAATGCTGGATGAGAAAACCCCTCCCTCACCCTCAGGACAACCTGAGGAGCCGGGGATGGTGCGCCTGGTGTGTGGACACCATAATTGGATCGCTGTGGCCTATACCCAGTTTCTAGTCTGCTACAGGTTGAAGGAAGCCTCTGGCTGGCAGCTGGTGTTTTCCAGCCCCCGCCTGGACTGGCCCATCGAACGACTGGCGCTCACAGCCCGGGTGCATGGTGGGGCTTTGGGTGAACATGACAAGATGGTGGCAGCAGCCACCGGCAGCGAGATCCTGCTATGGGCTCTGCAGGCGGAAGGCGGTGGCTCCGAGATAGGGCGCATCGGGGTGTGGAATGCCGTCACCAAGCACTGGCAGGTCCAGGAGGTGCAGCCCATCACCAGTTATGACGCGGCAGGCTCCTTCCTCCTCCTGGGCTGCAACAACGGCTCCATTTACTACGTGGATGTGCAGAAGTTCCCCTTGCGCATGAAAGACAACGACCTCCTTGTCAGCGAGCTCTATCGGGACCCAGCGGAGGATGGGGTCACCGCCCTCAGTGTCTACCTCACCCCCAAGACCAGTGACAGTGGGAACTGGATCGAGATCGCCTATGGCACCAGCTCAGGGGGCGTGCGGGTCATCGTGCAGCACCCGGAGACTGTGGGCTCGGGGCCTCAGCTCTTCCAGACCTTCACTGTGCACCGCAGCCCTGTCACCAAGATCATGCTGTCGGAGAAGCACCTCATCTCAGTCTGTGCCGACAACAACCACGTGCGGACATGGTCTGTGACTCGCTTCCGCGGCATGATTTCCACCCAGCCCGGCTCCACCCCACTCGCTTCCTTTAAGATCCTGGCTCTGGAGTCGGCAGATGGGCATGGCGGCTGCAGTGCTGGCAATGACATTGGCCCCTACGGTGAGCGGGACGACCAGCAAGTGTTCATCCAGAAGGTGGTGCCCAGTGCCAGCCAGCTCTTCGTGCGTCTCTCATCTACTGGGCAGCGGGTGTGCTCCGTGCGCTCCGTGGACGGCTCACCCACGACAGCCTTCACAGTGCTGGAGTGCGAGGGCTCCCGGCGGCTCGGCTCTCGGCCCCGGCGCTACCTGCTCACTGGCCAGGCCAACGGCAGCTTGGCCATGTGGGACCTAACCACCGCCATGGACGGCCTCGGCCAGGCCCCTGCAGGTGGCCTGACGGAGCAAGAGCTGATGGAACAGCTGGAACACTGTGAGCTGGCCCCGCCGGCTCCTTCAGCTCCCTCATGGGGCTGTCTCCCCAGCCCCTCACCCCGCATCTCCCTCACCAGCCTCCACTCAGCCTCCAGCAACACCTCCTTGTCTGGCCACCGTGGGAGCCCAAGCCCCCCGCAGGCTGAGGCCCGGCGCCGTGGTGGGGGCAGCTTTGTGGAACGCTGCCAGGAACTGGTGCGGAGTGGGCCAGACCTCCGACGGCCACCCACACCAGCCCCGTGGCCCTCCAGCGGTCTCGGCACTCCCCTCACACCTCCCAAGATGAAGCTCAATGAAACTTCCTTTTGA
Amino sequence
MAAAATAAEGVPSRGPPGEVIHLNVGGKRFSTSRQTLTWIPDSFFSSLLSGRISTLKDETGAIFIDRDPTVFAPILNFLRTKELDPRGVHGSSLLHEAQFYGLTPLVRRLQLREELDRSSCGNVLFNGYLPPPVFPVKRRNRHSLVGPQQLGGRPAPVRRSNTMPPNLGNAGLLGRMLDEKTPPSPSGQPEEPGMVRLVCGHHNWIAVAYTQFLVCYRLKEASGWQLVFSSPRLDWPIERLALTARVHGGALGEHDKMVAAATGSEILLWALQAEGGGSEIGRIGVWNAVTKHWQVQEVQPITSYDAAGSFLLLGCNNGSIYYVDVQKFPLRMKDNDLLVSELYRDPAEDGVTALSVYLTPKTSDSGNWIEIAYGTSSGGVRVIVQHPETVGSGPQLFQTFTVHRSPVTKIMLSEKHLISVCADNNHVRTWSVTRFRGMISTQPGSTPLASFKILALESADGHGGCSAGNDIGPYGERDDQQVFIQKVVPSASQLFVRLSSTGQRVCSVRSVDGSPTTAFTVLECEGSRRLGSRPRRYLLTGQANGSLAMWDLTTAMDGLGQAPAGGLTEQELMEQLEHCELAPPAPSAPSWGCLPSPSPRISLTSLHSASSNTSLSGHRGSPSPPQAEARRRGGGSFVERCQELVRSGPDLRRPPTPAPWPSSGLGTPLTPPKMKLNETSF*