ENST00000317276.9 PER1

Information
Transcript ID
ENST00000317276.9
Genome
hg38
Position
chr17:8,140,472-8,152,404
Strand
-
CDS length
3,873
Amino acid length
1,291
Gene symbol
PER1
Gene type
protein-coding
Gene description
period circadian regulator 1
Gene Entrez Gene ID
5187
Variants

Display target variant


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Target data :
MGeND data only
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Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
Search Word
Target data :
MGeND data only
Category :
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Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Search Word
Target data :
MGeND data only
Category :
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Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
23 8,140,472 8,141,340
22 8,141,805 8,141,955
21 8,142,269 8,142,458
20 8,142,649 8,142,835
19 8,143,266 8,143,876
18 8,144,751 8,144,993
17 8,145,958 8,146,137
16 8,146,372 8,146,502
15 8,146,594 8,146,765
14 8,146,897 8,147,002
13 8,147,250 8,147,381
12 8,147,470 8,147,578
11 8,147,674 8,147,827
10 8,147,997 8,148,103
9 8,148,181 8,148,259
8 8,148,644 8,148,786
7 8,149,259 8,149,310
6 8,149,462 8,149,663
5 8,149,755 8,149,876
4 8,149,971 8,150,125
3 8,150,219 8,150,317
2 8,150,432 8,150,845
1 8,152,337 8,152,404
CDS
Exon number Type Start Stop
23 CDS 8,141,068 8,141,340
22 CDS 8,141,805 8,141,955
21 CDS 8,142,269 8,142,458
20 CDS 8,142,649 8,142,835
19 CDS 8,143,266 8,143,876
18 CDS 8,144,751 8,144,993
17 CDS 8,145,958 8,146,137
16 CDS 8,146,372 8,146,502
15 CDS 8,146,594 8,146,765
14 CDS 8,146,897 8,147,002
13 CDS 8,147,250 8,147,381
12 CDS 8,147,470 8,147,578
11 CDS 8,147,674 8,147,827
10 CDS 8,147,997 8,148,103
9 CDS 8,148,181 8,148,259
8 CDS 8,148,644 8,148,786
7 CDS 8,149,259 8,149,310
6 CDS 8,149,462 8,149,663
5 CDS 8,149,755 8,149,876
4 CDS 8,149,971 8,150,125
3 CDS 8,150,219 8,150,317
2 CDS 8,150,432 8,150,706
Other genome
Genome Chromosome Start End Links
hg19 chr17 8,043,790 8,055,722 Link
CDS sequence
ATGAGTGGCCCCCTAGAAGGGGCTGATGGGGGAGGGGACCCCAGGCCTGGGGAATCATTTTGTCCTGGGGGCGTCCCATCCCCTGGGCCCCCACAGCACCGGCCTTGCCCAGGCCCCAGCCTGGCCGATGACACCGATGCCAACAGCAATGGTTCAAGTGGCAATGAGTCCAACGGGCATGAGTCTAGAGGCGCATCTCAGCGGAGCTCACACAGCTCCTCCTCAGGCAACGGCAAGGACTCAGCCCTGCTGGAGACCACTGAGAGCAGCAAGAGCACAAACTCTCAGAGCCCATCCCCACCCAGCAGTTCCATTGCCTACAGCCTCCTGAGTGCCAGCTCAGAGCAGGACAACCCGTCCACCAGTGGCTGCAGCAGTGAACAGTCAGCCCGGGCAAGGACTCAGAAGGAACTCATGACAGCACTTCGAGAGCTCAAGCTTCGACTGCCGCCAGAGCGCCGGGGCAAGGGCCGCTCTGGGACCCTGGCCACGCTGCAGTACGCACTGGCCTGTGTCAAGCAGGTGCAGGCCAACCAGGAATACTACCAGCAGTGGAGCCTGGAGGAGGGCGAGCCTTGCTCCATGGACATGTCCACCTATACCCTGGAGGAGCTGGAGCACATCACGTCTGAGTACACACTTCAGAACCAGGATACCTTCTCAGTGGCTGTCTCCTTCCTGACGGGCCGAATCGTCTACATTTCGGAGCAGGCAGCCGTCCTGCTGCGTTGCAAGCGGGACGTGTTCCGGGGTACCCGCTTCTCTGAGCTCCTGGCTCCCCAGGATGTGGGAGTCTTCTATGGTTCCACTGCTCCATCTCGCCTGCCCACCTGGGGCACAGGGGCCTCAGCAGGTTCAGGCCTCAGGGACTTTACCCAGGAGAAGTCCGTCTTCTGCCGTATCAGAGGAGGTCCTGACCGGGATCCAGGGCCTCGGTACCAGCCATTCCGCCTAACCCCGTATGTGACCAAGATCCGGGTCTCAGATGGGGCCCCTGCACAGCCGTGCTGCCTGCTGATTGCAGAGCGCATCCATTCGGGTTACGAAGCTCCCCGGATACCCCCTGACAAGAGGATTTTCACTACGCGGCACACACCCAGCTGCCTCTTCCAGGATGTGGATGAAAGGGCTGCCCCCCTGCTGGGCTACCTGCCCCAGGACCTCCTGGGGGCCCCAGTGCTCCTGTTCCTGCATCCTGAGGACCGACCCCTCATGCTGGCTATCCACAAGAAGATTCTGCAGTTGGCGGGCCAGCCCTTTGACCACTCCCCTATCCGCTTCTGTGCCCGCAACGGGGAGTATGTCACCATGGACACCAGCTGGGCTGGCTTTGTGCACCCCTGGAGCCGCAAGGTAGCCTTCGTGTTGGGCCGCCACAAAGTACGCACGGCCCCCCTGAATGAGGACGTGTTCACTCCCCCGGCCCCCAGCCCAGCTCCCTCCCTGGACACTGATATCCAGGAGCTGTCAGAGCAGATCCACCGGCTGCTGCTGCAGCCCGTCCACAGCCCCAGCCCCACGGGACTCTGTGGAGTCGGCGCCGTGACATCCCCAGGCCCTCTCCACAGCCCTGGGTCCTCCAGTGATAGCAACGGGGGTGATGCAGAGGGGCCTGGGCCTCCTGCGCCAGTGACTTTCCAGCAGATCTGTAAGGATGTGCATCTGGTGAAGCACCAGGGCCAGCAGCTTTTTATTGAGTCTCGGGCCCGGCCTCAGTCCCGGCCCCGCCTCCCTGCTACAGGCACGTTCAAGGCCAAGGCCCTTCCCTGCCAATCCCCAGACCCAGAGCTGGAGGCGGGTTCTGCTCCCGTCCAGGCCCCACTAGCCTTGGTCCCTGAGGAGGCCGAGAGGAAAGAAGCCTCCAGCTGCTCCTACCAGCAGATCAACTGCCTGGACAGCATCCTCAGGTACCTGGAGAGCTGCAACCTCCCCAGCACCACTAAGCGTAAATGTGCCTCCTCCTCCTCCTATACCACCTCCTCAGCCTCTGACGACGACAGGCAGAGGACAGGTCCAGTCTCTGTGGGGACCAAGAAAGATCCGCCGTCAGCAGCGCTGTCTGGGGAGGGGGCCACCCCACGGAAGGAGCCAGTGGTGGGAGGCACCCTGAGCCCGCTCGCCCTGGCCAATAAGGCGGAGAGTGTGGTGTCCGTCACCAGTCAGTGTAGCTTCAGCTCCACCATCGTCCATGTGGGAGACAAGAAGCCCCCGGAGTCGGACATCATCATGATGGAGGACCTGCCTGGCCTAGCCCCAGGCCCAGCCCCCAGCCCAGCCCCCAGCCCCACAGTAGCCCCTGACCCAGCCCCAGACGCCTACCGTCCAGTGGGGCTGACCAAGGCCGTGCTGTCCCTGCACACACAGAAGGAAGAGCAAGCCTTCCTCAGCCGCTTCCGAGACCTGGGCAGGCTGCGTGGACTCGACAGCTCTTCCACAGCTCCCTCAGCCCTTGGCGAGCGAGGCTGCCACCACGGCCCCGCACCCCCAAGCCGCCGACACCACTGCCGATCCAAAGCCAAGCGCTCACGCCACCACCAGAACCCTCGGGCTGAAGCGCCCTGCTATGTCTCACACCCCTCACCCGTGCCACCCTCCACCCCCTGGCCCACCCCACCAGCCACTACCCCCTTCCCAGCGGTTGTCCAGCCCTACCCTCTCCCAGTGTTCTCTCCTCGAGGAGGCCCCCAGCCTCTTCCCCCTGCTCCCACATCTGTGCCCCCAGCTGCTTTCCCCGCCCCTTTGGTGACCCCAATGGTGGCCTTGGTGCTCCCTAACTATCTGTTCCCAACCCCATCCAGCTATCCTTATGGGGCACTCCAGACCCCTGCTGAAGGGCCTCCCACTCCTGCCTCGCACTCCCCTTCTCCATCCTTGCCCGCCCTCGCCCCGAGTCCTCCTCACCGCCCGGACTCTCCACTGTTCAACTCGAGATGCAGCTCTCCACTCCAGCTCAATCTGCTGCAGCTGGAGGAGCTCCCCCGTGCTGAGGGGGCTGCTGTTGCAGGAGGCCCTGGGAGCAGTGCCGGGCCCCCACCTCCCAGTGCGGAGGCTGCTGAGCCAGAGGCCAGACTGGCGGAGGTCACTGAGTCCTCCAATCAGGACGCACTTTCCGGCTCCAGTGACCTGCTCGAACTTCTGCTGCAAGAGGACTCGCGCTCCGGCACAGGCTCCGCAGCCTCGGGCTCCTTGGGCTCTGGCTTGGGCTCTGGGTCTGGTTCAGGCTCCCATGAAGGGGGCAGCACCTCAGCCAGCATCACTCGCAGCAGCCAGAGCAGCCACACAAGCAAATACTTTGGCAGCATCGACTCTTCCGAGGCTGAGGCTGGGGCTGCTCGGGGCGGGGCTGAGCCTGGGGACCAGGTGATTAAGTACGTGCTCCAGGATCCCATTTGGCTGCTCATGGCCAATGCTGACCAGCGCGTCATGATGACCTACCAGGTGCCCTCCAGGGACATGACCTCTGTGCTGAAGCAGGATCGGGAGCGGCTCCGAGCCATGCAGAAGCAGCAGCCTCGGTTTTCTGAGGACCAGCGGCGGGAACTGGGTGCTGTGCACTCCTGGGTCCGGAAGGGCCAACTGCCTCGGGCTCTTGATGTGATGGCCTGTGTGGACTGTGGGAGCAGCACCCAAGATCCTGGTCACCCTGATGACCCACTCTTCTCAGAGCTGGATGGACTGGGGCTGGAGCCCATGGAAGAGGGTGGAGGCGAGCAGGGCAGCAGCGGTGGCGGCAGTGGTGAGGGAGAGGGCTGCGAGGAGGCCCAAGGCGGGGCCAAGGCTTCAAGCTCTCAGGACTTGGCTATGGAGGAGGAGGAAGAAGGCAGGAGCTCATCCAGTCCAGCCTTACCTACAGCAGGAAACTGCACCAGCTAG
Amino sequence
MSGPLEGADGGGDPRPGESFCPGGVPSPGPPQHRPCPGPSLADDTDANSNGSSGNESNGHESRGASQRSSHSSSSGNGKDSALLETTESSKSTNSQSPSPPSSSIAYSLLSASSEQDNPSTSGCSSEQSARARTQKELMTALRELKLRLPPERRGKGRSGTLATLQYALACVKQVQANQEYYQQWSLEEGEPCSMDMSTYTLEELEHITSEYTLQNQDTFSVAVSFLTGRIVYISEQAAVLLRCKRDVFRGTRFSELLAPQDVGVFYGSTAPSRLPTWGTGASAGSGLRDFTQEKSVFCRIRGGPDRDPGPRYQPFRLTPYVTKIRVSDGAPAQPCCLLIAERIHSGYEAPRIPPDKRIFTTRHTPSCLFQDVDERAAPLLGYLPQDLLGAPVLLFLHPEDRPLMLAIHKKILQLAGQPFDHSPIRFCARNGEYVTMDTSWAGFVHPWSRKVAFVLGRHKVRTAPLNEDVFTPPAPSPAPSLDTDIQELSEQIHRLLLQPVHSPSPTGLCGVGAVTSPGPLHSPGSSSDSNGGDAEGPGPPAPVTFQQICKDVHLVKHQGQQLFIESRARPQSRPRLPATGTFKAKALPCQSPDPELEAGSAPVQAPLALVPEEAERKEASSCSYQQINCLDSILRYLESCNLPSTTKRKCASSSSYTTSSASDDDRQRTGPVSVGTKKDPPSAALSGEGATPRKEPVVGGTLSPLALANKAESVVSVTSQCSFSSTIVHVGDKKPPESDIIMMEDLPGLAPGPAPSPAPSPTVAPDPAPDAYRPVGLTKAVLSLHTQKEEQAFLSRFRDLGRLRGLDSSSTAPSALGERGCHHGPAPPSRRHHCRSKAKRSRHHQNPRAEAPCYVSHPSPVPPSTPWPTPPATTPFPAVVQPYPLPVFSPRGGPQPLPPAPTSVPPAAFPAPLVTPMVALVLPNYLFPTPSSYPYGALQTPAEGPPTPASHSPSPSLPALAPSPPHRPDSPLFNSRCSSPLQLNLLQLEELPRAEGAAVAGGPGSSAGPPPPSAEAAEPEARLAEVTESSNQDALSGSSDLLELLLQEDSRSGTGSAASGSLGSGLGSGSGSGSHEGGSTSASITRSSQSSHTSKYFGSIDSSEAEAGAARGGAEPGDQVIKYVLQDPIWLLMANADQRVMMTYQVPSRDMTSVLKQDRERLRAMQKQQPRFSEDQRRELGAVHSWVRKGQLPRALDVMACVDCGSSTQDPGHPDDPLFSELDGLGLEPMEEGGGEQGSSGGGSGEGEGCEEAQGGAKASSSQDLAMEEEEEGRSSSSPALPTAGNCTS*