ENST00000379013.6 UPK1A

Information
Transcript ID
ENST00000379013.6
Genome
hg38
Position
chr19:35,666,813-35,678,160
Strand
+
CDS length
822
Amino acid length
274
Gene symbol
UPK1A
Gene type
protein-coding
Gene description
uroplakin 1A
Gene Entrez Gene ID
11045
Variants

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Target data :
MGeND data only
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Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
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Target data :
MGeND data only
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Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
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Target data :
MGeND data only
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Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
1 35,666,813 35,666,896
2 35,668,454 35,668,654
3 35,673,232 35,673,306
4 35,673,438 35,673,545
5 35,675,840 35,676,019
6 35,676,236 35,676,333
7 35,677,812 35,677,895
8 35,677,975 35,678,160
CDS
Exon number Type Start Stop
1 CDS 35,666,813 35,666,896
2 CDS 35,668,454 35,668,654
3 CDS 35,673,232 35,673,306
4 CDS 35,673,438 35,673,545
5 CDS 35,675,840 35,676,019
6 CDS 35,676,236 35,676,333
7 CDS 35,677,812 35,677,887
Other genome
Genome Chromosome Start End Links
hg19 chr19 36,157,715 36,169,062 Link
CDS sequence
ATGGCGTCTGCGGCAGCAGCGGAGGCCGAGAAGGGATCTCCAGTTGTGGTGGGCCTGCTAGTTGTGGGCAATATCATTATTCTGCTGTCAGGCCTGTCCCTGTTTGCTGAGACCATATGGGTGACAGCCGACCAGTACCGTGTATACCCACTGATGGGAGTCTCAGGCAAGGATGACGTCTTCGCTGGTGCCTGGATTGCCATCTTCTGCGGCTTCTCCTTCTTCATGGTAGCCAGTTTTGGTGTGGGTGCCGCACTCTGCCGCCGCCGGTCCATGGTCCTCACGTACCTGGTGCTCATGCTCATCGTCTACATCTTCGAGTGCGCCTCCTGCATCACGTCCTACACCCACCGTGACTACATGGTGTCCAACCCATCCCTGATCACCAAGCAGATGCTGACCTTCTACAGCGCGGACACCGACCAGGGCCAGGAGCTGACCCGCCTCTGGGACCGCGTCATGATTGAGCAAGAATGCTGTGGCACATCTGGTCCCATGGACTGGGTGAACTTCACGTCAGCCTTCCGGGCGGCCACTCCGGAGGTGGTGTTCCCCTGGCCCCCACTGTGCTGTCGCCGGACGGGAAACTTCATCCCCCTCAACGAGGAGGGCTGCCGCCTGGGGCACATGGACTACCTGTTCACCAAGGCTGGAGTACAGTGGCACAATCTCAGCTCACTGCAGCGTCTGCCTCCCGGGTTCAAGGGATTCTCCCACCTCAGCTTCCAGAGCAGCTGGGATTACAGGGCTGCTTCGAACACATCGGCCACGCCATCGACAGCTACACGTGGGGTATCTCGTGGTTTGGGTTTGCCATCCTGA
Amino sequence
MASAAAAEAEKGSPVVVGLLVVGNIIILLSGLSLFAETIWVTADQYRVYPLMGVSGKDDVFAGAWIAIFCGFSFFMVASFGVGAALCRRRSMVLTYLVLMLIVYIFECASCITSYTHRDYMVSNPSLITKQMLTFYSADTDQGQELTRLWDRVMIEQECCGTSGPMDWVNFTSAFRAATPEVVFPWPPLCCRRTGNFIPLNEEGCRLGHMDYLFTKAGVQWHNLSSLQRLPPGFKGFSHLSFQSSWDYRAASNTSATPSTATRGVSRGLGLPS*