ENST00000422556.1 SPATA2

Information
Transcript ID
ENST00000422556.1
Genome
hg38
Position
chr20:49,903,394-49,913,739
Strand
-
CDS length
1,563
Amino acid length
521
Gene symbol
SPATA2
Gene type
protein-coding
Gene description
spermatogenesis associated 2
Gene Entrez Gene ID
9825
Variants

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Target data :
MGeND data only
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Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
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Target data :
MGeND data only
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Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
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Target data :
MGeND data only
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Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
3 49,903,394 49,906,845
2 49,908,155 49,908,592
1 49,913,492 49,913,739
CDS
Exon number Type Start Stop
3 CDS 49,905,619 49,906,845
2 CDS 49,908,155 49,908,490
Other genome
Genome Chromosome Start End Links
hg19 chr20 48,519,931 48,530,276 Link
CDS sequence
ATGGGGAAGCCCAGTTCAATGGATACTAAATTCAAGGATGACTTATTTCGGAAGTACGTGCAGTTCCATGAGAGCAAAGTGGATACCACCACCAGCAGGCAGCGGCCTGGCAGCGATGAGTGCCTGCGGGTGGCAGCCTCAACCCTGCTCAGCCTGCACAAGGTGGATCCCTTTTATCGATTCCGGCTGATCCAGTTCTATGAGGTGGTGGAGAGCTCCTTGCGCTCGCTCAGCTCCTCTAGCCTGCGGGCTCTGCACGGCGCCTTCAGCATGCTGGAGACGGTGGGCATCAACCTCTTCCTCTACCCGTGGAAGAAGGAATTCAGAAGCATCAAGACCTACACGGGCCCTTTTGTTTATTATGTCAAGTCGACATTACTGGAAGAGGACATCCGAGCCATCCTGAGCTGCATGGGCTACACACCTGAGCTGGGCACTGCATACAAGCTCAGAGAGCTCGTGGAGACCCTCCAGGTGAAGATGGTCTCCTTTGAGCTCTTTCTGGCCAAAGTCGAGTGTGAGCAGATGCTAGAAATCCACTCACAAGTGAAGGACAAGGGCTACTCCGAGCTGGACATTGTGAGCGAGCGCAAGAGCAGTGCAGAGGATGTGCGCGGCTGCTCGGACGCCCTGCGGCGGCGGGCAGAGGGCCGGGAGCACCTGACGGCCTCCATGTCACGAGTGGCACTCCAGAAGTCGGCCAGCGAGCGGGCGGCCAAGGACTACTACAAGCCCCGCGTGACCAAGCCCTCGAGGTCAGTGGATGCCTATGACAGCTACTGGGAGAGCCGGAAGCCACCCCTGAAGGCCTCATTGAGTCTTCGGAAGGAGCCTGTGGCAACGGATGTGGGGGACGACCTCAAGGATGAGATCATCCGCCCATCCCCTTCGCTGCTGACCATGGCCAGCTCCCCCCACGGCAGCCCGGATGTGCTTCCACCCGCCTCCCCCAGCAACGGCCCGGCCCTGCTGCGCGGTACCTACTTCTCCACTCAGGATGACGTGGATCTGTACACAGACTCTGAACCCAGGGCCACCTACCGTCGGCAGGATGCTCTGCGGCCGGATGTGTGGCTGCTCAGAAACGATGCCCACTCCCTCTACCACAAGCGCTCGCCCCCTGCCAAAGAGTCCGCCCTCTCCAAGTGCCAAAGCTGCGGGCTGTCCTGCAGCTCCTCCCTCTGCCAGCGCTGTGACAGCCTGCTCACCTGTCCTCCAGCTTCCAAGCCCAGCGCCTTCCCCAGCAAGGCCTCGACTCATGACAGCCTGGCCCACGGGGCATCTCTGCGGGAGAAGTACCCAGGCCAGACTCAGGGCCTCGACCGCCTCCCGCACCTTCACTCCAAATCCAAGCCCTCCACCACGCCCACTTCCCGCTGTGGCTTCTGCAACCGCCCAGGCGCCACCAACACCTGCACCCAGTGTTCAAAAGTCTCATGTGACGCCTGCCTCAGCGCTTACCATTATGACCCCTGCTACAAAAAGAGTGAGCTGCACAAGTTCATGCCCAACAACCAGCTGAACTACAAGTCCACCCAGCTCTCCCATCTCGTGTACAGATAG
Amino sequence
MGKPSSMDTKFKDDLFRKYVQFHESKVDTTTSRQRPGSDECLRVAASTLLSLHKVDPFYRFRLIQFYEVVESSLRSLSSSSLRALHGAFSMLETVGINLFLYPWKKEFRSIKTYTGPFVYYVKSTLLEEDIRAILSCMGYTPELGTAYKLRELVETLQVKMVSFELFLAKVECEQMLEIHSQVKDKGYSELDIVSERKSSAEDVRGCSDALRRRAEGREHLTASMSRVALQKSASERAAKDYYKPRVTKPSRSVDAYDSYWESRKPPLKASLSLRKEPVATDVGDDLKDEIIRPSPSLLTMASSPHGSPDVLPPASPSNGPALLRGTYFSTQDDVDLYTDSEPRATYRRQDALRPDVWLLRNDAHSLYHKRSPPAKESALSKCQSCGLSCSSSLCQRCDSLLTCPPASKPSAFPSKASTHDSLAHGASLREKYPGQTQGLDRLPHLHSKSKPSTTPTSRCGFCNRPGATNTCTQCSKVSCDACLSAYHYDPCYKKSELHKFMPNNQLNYKSTQLSHLVYR*