ENST00000614115.5 TCTN1

Information
Transcript ID
ENST00000614115.5
Genome
hg38
Position
chr12:110,614,113-110,647,893
Strand
+
CDS length
1,617
Amino acid length
539
Gene symbol
TCTN1
Gene type
protein-coding
Gene description
tectonic family member 1
Gene Entrez Gene ID
79600
Variants

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Target data :
MGeND data only
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Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
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Target data :
MGeND data only
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Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
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Target data :
MGeND data only
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Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
1 110,614,113 110,614,402
2 110,619,836 110,619,956
3 110,626,362 110,626,492
4 110,628,767 110,628,918
5 110,632,472 110,632,559
6 110,634,670 110,634,779
7 110,636,481 110,636,501
8 110,640,383 110,640,517
9 110,641,024 110,641,149
10 110,641,542 110,641,627
11 110,644,973 110,645,129
12 110,647,211 110,647,336
13 110,647,749 110,647,893
CDS
Exon number Type Start Stop
1 CDS 110,614,183 110,614,402
2 CDS 110,619,836 110,619,956
3 CDS 110,626,362 110,626,492
4 CDS 110,628,767 110,628,918
5 CDS 110,632,472 110,632,559
6 CDS 110,634,670 110,634,779
7 CDS 110,636,481 110,636,501
8 CDS 110,640,383 110,640,517
9 CDS 110,641,024 110,641,149
10 CDS 110,641,542 110,641,627
11 CDS 110,644,973 110,645,129
12 CDS 110,647,211 110,647,336
13 CDS 110,647,749 110,647,892
Other genome
Genome Chromosome Start End Links
hg19 chr12 111,051,918 111,085,698 Link
CDS sequence
ATGAGGCCGCGAGGTCTCCCGCCGCTCCTGGTGGTGCTCCTGGGCTGCTGGGCCTCCGTGAGCGCCCAGACCGATGCCACCCCGGCGGTGACGACAGAGGGCCTCAACTCCACCGAGGCAGCCCTGGCCACCTTCGGAACTTTCCCGTCGACCAGGCCCCCCGGGACTCCCAGGGCTCCAGGGCCCTCCTCCGGCCCCAGGCCTACCCCAGTCACGGACGTTGCTGTTCTCTGTGTCTGTGACTTATCCCCAGCACAGTGTGACATCAACTGCTGCTGTGATCCCGACTGCAGCTCCGTGGATTTCAGTGTCTTTTCTGCCTGCTCAGTTCCAGTTGTCACGGGCGACAGCCAGTTTTGTAGTCAAAAAGCAGTCATCTATTCATTGAATTTTACAGCAAACCCACCTCAAAGAGTATTTGAACTTGTTGACCAGATTAATCCATCTATTTTCTGCATTCATATTACAAACTATAAACCTGCATTATCCTTTATTAATCCAGAAGTACCTGATGAAAACAATTTTGATACATTGATGAAAACATCTGATGGTTTTACATTGAATGCTGAATCATATGTTTCCTTCACAACCAAACTGGATATTCCTACTGCTGCTAAATATGAGTATGGGGTTCCTCTGCAGACTTCAGATTCGTTTCTGAGATTTCCTTCGTCCCTGACATCATCTCTGTGCACTGATAATAACCCTGCAGCGTTTCTGGTGAACCAGGCTGTTAAGTGCACCAGAAAAATAAATTTAGAACAGTGTGAAGAAATTGAAGCCCTCAGCATGGCTTTTTACAGCAGCCCGGAAATTCTGAGGGTACCTGATTCAAGAAAAAAGGTCCCTATCACTGTTCAGTCCATCGTCATTCAGTCTCTAAATAAAACGCTCACCCGACGGGAGGACACTGATGTGCTGCAGCCGACTCTCGTCAACGCTGGACACTTTAGCCTTTGCGTGAATGTTGTTCTTGAGGTAAAGTACAGCCTCACATACACAGATGCAGGTGAAGTCACCAAAGCTGATCTCTCATTCGTTCTGGGGACAGTTAGCAGCGTAGTGGTCCCACTGCAGCAAAAGTTTGAAATTCATTTTCTTCAGGAAAATACCCAGCCAGTCCCTCTCAGTGGAAACCCTGGTTATGTCGTGGGGCTCCCATTAGCTGCTGGATTCCAGCCTCATAAGGGTGGAGCTCTCCCGTGTCAGCTCGTAGCACAGAAGGTGAAGAGCCTGCTGTGGGGCCAGGGCTTCCCAGATTACGTGGCCCCTTTTGGAAATTCCCAGGCCCAGGACATGCTGGACTGGGTGCCCATCCACTTCATCACCCAGTCATTCAACAGGAAGGATTCCTGCCAGCTCCCAGGGGCTTTGGTTATAGAAGTGAAGTGGACTAAATACGGATCCCTGCTGAATCCACAGGCCAAAATAGTCAATGTAACTGCAAATCTAATTTCATCCTCCTTTCCTGAGGCCAACTCAGGAAATGAAAGGACGATTCTTATTTCCACTGCGGTTACTTTTGTGGATGTGTCTGCACCTGCAGAGGCAGGCTTCAGAGCTCCACCAGCCATCAATGCCAGGCTGCCCTTTAACTTCTTCTTCCCGTTTGTTTGA
Amino sequence
MRPRGLPPLLVVLLGCWASVSAQTDATPAVTTEGLNSTEAALATFGTFPSTRPPGTPRAPGPSSGPRPTPVTDVAVLCVCDLSPAQCDINCCCDPDCSSVDFSVFSACSVPVVTGDSQFCSQKAVIYSLNFTANPPQRVFELVDQINPSIFCIHITNYKPALSFINPEVPDENNFDTLMKTSDGFTLNAESYVSFTTKLDIPTAAKYEYGVPLQTSDSFLRFPSSLTSSLCTDNNPAAFLVNQAVKCTRKINLEQCEEIEALSMAFYSSPEILRVPDSRKKVPITVQSIVIQSLNKTLTRREDTDVLQPTLVNAGHFSLCVNVVLEVKYSLTYTDAGEVTKADLSFVLGTVSSVVVPLQQKFEIHFLQENTQPVPLSGNPGYVVGLPLAAGFQPHKGGALPCQLVAQKVKSLLWGQGFPDYVAPFGNSQAQDMLDWVPIHFITQSFNRKDSCQLPGALVIEVKWTKYGSLLNPQAKIVNVTANLISSSFPEANSGNERTILISTAVTFVDVSAPAEAGFRAPPAINARLPFNFFFPFV*