ENST00000245923.9 RTN2

Information
Transcript ID
ENST00000245923.9
Genome
hg38
Position
chr19:45,485,294-45,497,047
Strand
-
CDS length
1,638
Amino acid length
546
Gene symbol
RTN2
Gene type
protein-coding
Gene description
reticulon 2
Gene Entrez Gene ID
6253
Variants

Display target variant


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Target data :
MGeND data only
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Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
Search Word
Target data :
MGeND data only
Category :
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Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Search Word
Target data :
MGeND data only
Category :
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Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
11 45,485,294 45,485,789
10 45,486,055 45,486,113
9 45,488,471 45,488,517
8 45,488,637 45,488,706
7 45,488,848 45,488,986
6 45,489,346 45,489,553
5 45,493,160 45,493,378
4 45,494,166 45,494,420
3 45,494,526 45,495,005
2 45,495,095 45,495,139
1 45,496,792 45,497,047
CDS
Exon number Type Start Stop
11 CDS 45,485,708 45,485,789
10 CDS 45,486,055 45,486,113
9 CDS 45,488,471 45,488,517
8 CDS 45,488,637 45,488,706
7 CDS 45,488,848 45,488,986
6 CDS 45,489,346 45,489,553
5 CDS 45,493,160 45,493,378
4 CDS 45,494,166 45,494,420
3 CDS 45,494,526 45,495,005
2 CDS 45,495,095 45,495,139
1 CDS 45,496,792 45,496,825
Other genome
Genome Chromosome Start End Links
hg19 chr19 45,988,552 46,000,305 Link
CDS sequence
ATGGGGCAGGTCCTGCCGGTCTTCGCCCACTGCAAAGAAGCTCCGTCTACAGCCTCCTCAACTCCTGATTCCACAGAAGGAGGGAACGACGACTCTGATTTTCGAGAGCTGCACACAGCCCGGGAATTCTCAGAGGAGGACGAGGAGGAGACCACGTCGCAGGACTGGGGCACCCCCCGGGAGCTGACCTTCTCCTACATCGCCTTTGATGGTGTAGTGGGCTCCGGGGGCCGCAGGGATTCAACTGCCCGCCGCCCCCGCCCCCAGGGCCGCTCAGTCTCGGAACCACGAGACCAGCACCCTCAGCCCAGCCTGGGCGACAGCTTGGAGAGCATCCCCAGCCTGAGCCAATCCCCGGAGCCTGGACGACGGGGTGATCCTGACACCGCGCCTCCATCCGAGCGCCCTCTGGAAGACCTGAGGCTTCGGTTGGACCATCTGGGCTGGGTGGCCCGGGGAACGGGATCCGGGGAGGACTCTTCCACCAGCAGCTCCACCCCGCTGGAAGACGAAGAACCCCAAGAACCCAACAGATTGGAGACAGGAGAAGCTGGGGAAGAACTGGACCTACGACTCCGACTTGCTCAGCCCTCATCGCCCGAGGTCTTGACTCCCCAGCTCAGTCCGGGCTCTGGGACACCCCAGGCCGGTACTCCGTCCCCATCCCGATCGCGAGATTCGAACTCTGGGCCCGAAGAGCCATTGCTGGAAGAGGAAGAAAAGCAGTGGGGGCCACTGGAGCGAGAGCCAGTAAGGGGACAGTGCCTCGATAGCACGGACCAATTAGAATTCACGGTGGAGCCACGCCTTCTAGGAACAGCTATGGAATGGTTAAAGACATCATTGCTTTTGGCTGTTTACAAGACGGTTCCAATTTTGGAATTGTCCCCACCTCTGTGGACAGCCATTGGCTGGGTCCAAAGGGGCCCCACCCCCCCTACTCCTGTCCTCCGGGTTCTACTGAAGTGGGCAAAATCCCCGAGAAGCAGCGGTGTCCCCAGCCTCTCACTCGGAGCCGATATGGGGAGTAAAGTGGCGGACCTGCTGTACTGGAAGGACACGAGGACGTCAGGAGTGGTCTTCACAGGCCTGATGGTCTCCCTCCTCTGCCTCCTGCACTTTAGCATCGTGTCCGTGGCCGCGCACTTGGCTCTGTTGCTGCTCTGCGGCACCATCTCTCTCAGGGTTTACCGCAAAGTGCTGCAGGCCGTGCACCGGGGGGATGGAGCCAACCCTTTCCAGGCCTACCTGGATGTGGACCTCACCCTGACTCGGGAGCAGACGGAACGTTTGTCCCACCAGATCACCTCCCGCGTGGTCTCGGCGGCCACGCAGCTGCGGCACTTCTTCCTGGTAGAAGACCTCGTGGATTCCCTCAAGCTGGCCCTCCTCTTCTACATCTTGACCTTCGTGGGTGCCATCTTCAATGGTTTGACTCTTCTCATTCTGGGAGTGATTGGTCTATTCACCATCCCCCTGCTGTACCGGCAGCACCAGGCTCAGATCGACCAATATGTGGGGTTGGTGACCAATCAGTTGAGCCACATCAAAGCTAAGATCCGAGCTAAAATCCCAGGGACCGGAGCCCTGGCCTCTGCAGCAGCCGCAGTCTCCGGATCCAAAGCCAAAGCCGAATGA
Amino sequence
MGQVLPVFAHCKEAPSTASSTPDSTEGGNDDSDFRELHTAREFSEEDEEETTSQDWGTPRELTFSYIAFDGVVGSGGRRDSTARRPRPQGRSVSEPRDQHPQPSLGDSLESIPSLSQSPEPGRRGDPDTAPPSERPLEDLRLRLDHLGWVARGTGSGEDSSTSSSTPLEDEEPQEPNRLETGEAGEELDLRLRLAQPSSPEVLTPQLSPGSGTPQAGTPSPSRSRDSNSGPEEPLLEEEEKQWGPLEREPVRGQCLDSTDQLEFTVEPRLLGTAMEWLKTSLLLAVYKTVPILELSPPLWTAIGWVQRGPTPPTPVLRVLLKWAKSPRSSGVPSLSLGADMGSKVADLLYWKDTRTSGVVFTGLMVSLLCLLHFSIVSVAAHLALLLLCGTISLRVYRKVLQAVHRGDGANPFQAYLDVDLTLTREQTERLSHQITSRVVSAATQLRHFFLVEDLVDSLKLALLFYILTFVGAIFNGLTLLILGVIGLFTIPLLYRQHQAQIDQYVGLVTNQLSHIKAKIRAKIPGTGALASAAAAVSGSKAKAE*