ENST00000257905.13 PPP1R1A

Information
Transcript ID
ENST00000257905.13
Genome
hg38
Position
chr12:54,579,246-54,588,659
Strand
-
CDS length
516
Amino acid length
172
Gene symbol
PPP1R1A
Gene type
protein-coding
Gene description
protein phosphatase 1 regulatory inhibitor subunit 1A
Gene Entrez Gene ID
5502
Variants

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MGeND data only
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Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
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MGeND data only
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Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
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MGeND data only
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Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
7 54,579,246 54,580,392
6 54,580,944 54,581,050
5 54,581,976 54,582,131
4 54,582,732 54,582,795
3 54,583,211 54,583,248
2 54,584,260 54,584,320
1 54,588,405 54,588,659
CDS
Exon number Type Start Stop
7 CDS 54,580,387 54,580,392
6 CDS 54,580,944 54,581,050
5 CDS 54,581,976 54,582,131
4 CDS 54,582,732 54,582,795
3 CDS 54,583,211 54,583,248
2 CDS 54,584,260 54,584,320
1 CDS 54,588,405 54,588,488
Other genome
Genome Chromosome Start End Links
hg19 chr12 54,973,030 54,982,443 Link
CDS sequence
ATGGAGCAAGACAACAGCCCCCGAAAGATCCAGTTCACGGTCCCGCTGCTGGAGCCGCACCTTGACCCCGAGGCGGCGGAGCAGATTCGGAGGCGCCGCCCCACCCCTGCCACCCTCGTGCTGACCAGTGACCAGTCATCCCCAGAGATAGATGAAGACCGGATCCCCAACCCACATCTCAAGTCCACTTTGGCAATGTCTCCACGGCAACGGAAGAAGATGACAAGGATCACACCCACAATGAAAGAGCTCCAGATGATGGTTGAACATCACCTGGGGCAACAGCAGCAAGGAGAGGAACCTGAGGGGGCCGCTGAGAGCACAGGAACCCAGGAGTCCCGCCCACCTGGGATCCCAGACACAGAAGTGGAGTCAAGGCTGGGCACCTCTGGGACAGCAAAAAAAACTGCAGAATGCATCCCTAAAACTCACGAGAGAGGCAGTAAGGAACCCAGCACAAAAGAACCCTCAACCCATATACCACCACTGGATTCCAAGGGAGCCAACTCGGTCTGA
Amino sequence
MEQDNSPRKIQFTVPLLEPHLDPEAAEQIRRRRPTPATLVLTSDQSSPEIDEDRIPNPHLKSTLAMSPRQRKKMTRITPTMKELQMMVEHHLGQQQQGEEPEGAAESTGTQESRPPGIPDTEVESRLGTSGTAKKTAECIPKTHERGSKEPSTKEPSTHIPPLDSKGANSV*