ENST00000589146.5 CAPNS1

Information
Transcript ID
ENST00000589146.5
Genome
hg38
Position
chr19:36,139,953-36,149,912
Strand
+
CDS length
285
Amino acid length
95
Gene symbol
CAPNS1
Gene type
protein-coding
Gene description
calpain small subunit 1
Gene Entrez Gene ID
826
Variants

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Target data :
MGeND data only
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Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
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MGeND data only
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Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
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Target data :
MGeND data only
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Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
1 36,139,953 36,140,157
2 36,140,997 36,141,075
3 36,146,037 36,146,054
4 36,146,196 36,146,312
5 36,149,578 36,149,636
6 36,149,813 36,149,912
CDS
Exon number Type Start Stop
2 CDS 36,141,012 36,141,075
3 CDS 36,146,037 36,146,054
4 CDS 36,146,196 36,146,312
5 CDS 36,149,578 36,149,636
6 CDS 36,149,813 36,149,839
Other genome
Genome Chromosome Start End Links
hg19 chr19 36,630,855 36,640,814 Link
CDS sequence
ATGTTCCTGGTTAACTCGTTCTTGAAGGGCGGCGGCGGCGGCGGCGGGGGAGGCGGGGGCCTGGGTGCCTTTGAGGCAGCAGGGTTCCACCTGAATGAGCATCTCTATAACATGATCATCCGACGCTACTCAGATGAAAGTGGGAACATGGATTTTGACAACTTCATCAGCTGCTTGGTCAGGCTGGACGCCATGTTCCGTGCCTTCAAATCTCTTGACAAAGATGGCACTGGACAAATCCAGGTGAACATCCAGGAGTGGCTGCAGCTGACTATGTATTCCTGA
Amino sequence
MFLVNSFLKGGGGGGGGGGGLGAFEAAGFHLNEHLYNMIIRRYSDESGNMDFDNFISCLVRLDAMFRAFKSLDKDGTGQIQVNIQEWLQLTMYS*