ENST00000579565.5 MSL1

Information
Transcript ID
ENST00000579565.5
Genome
hg38
Position
chr17:40,122,614-40,134,450
Strand
+
CDS length
1,056
Amino acid length
352
Gene symbol
MSL1
Gene type
protein-coding
Gene description
MSL complex subunit 1
Gene Entrez Gene ID
339287
Variants

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Target data :
MGeND data only
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Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
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Target data :
MGeND data only
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Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
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Target data :
MGeND data only
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Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
1 40,122,614 40,122,760
2 40,123,285 40,123,380
3 40,126,183 40,126,406
4 40,129,245 40,129,627
5 40,131,537 40,131,584
6 40,132,034 40,132,098
7 40,133,042 40,133,109
8 40,133,534 40,133,658
9 40,133,827 40,133,899
10 40,134,279 40,134,450
CDS
Exon number Type Start Stop
3 CDS 40,126,204 40,126,406
4 CDS 40,129,245 40,129,627
5 CDS 40,131,537 40,131,584
6 CDS 40,132,034 40,132,098
7 CDS 40,133,042 40,133,109
8 CDS 40,133,534 40,133,658
9 CDS 40,133,827 40,133,899
10 CDS 40,134,279 40,134,369
Other genome
Genome Chromosome Start End Links
hg19 chr17 38,278,867 38,290,703 Link
CDS sequence
ATGGAAAGGCGGATGCAGCTGGTAAAGAAGGATAACGAGAAAGAAAGGCACAAGCTGTTTCAGGGCTATGAAACTGAAGAGAGAGAGGAAACAGAGCTATCTGAGAAAATTAAACTGGAGTGCCAGCCGGAGCTTTCCGAGACATCCCAGACTCTGCCTCCCAAGCCCTTCTCATGTGGGCGGAGTGGAAAGGGACATAAAAGGAAATCCCCATTTGGAAGTACAGAAAGAAAGACTCCTGTTAAAAAGCTGGCTCCTGAATTTTCAAAAGTCAAAACAAAAACTCCTAAGCACTCTCCTATTAAAGAGGAACCCTGTGGTTCCTTATCTGAAACTGTTTGTAAACGTGAATTGAGGAGCCAAGAAACCCCAGAAAAGCCCCGGTCTTCAGTGGACACCCCACCAAGACTCTCCACTCCCCAAAAGGGACCCAGCACCCATCCCAAGGAGAAAGCCTTCTCAAGTGAGATAGAAGATTTGCCGTACCTTTCCACCACAGAAATGTATTTGTGTCGTTGGCACCAGCCTCCCCCATCACCGTTACCATTACGGGAATCCTCTCCAAAGAAGGAGGAGACTGTAGCAAGGTGTCTGATGCCATCAAGTGTTGCAGGAGAAACTTCAGTCTTGGCTGTTCCTTCTTGGAGGGACCACTCAGTAGAGCCTCTAAGGGACCCAAATCCTTCAGACCTTTTGGAGAACCTGGATGACAGTGTGTTTTCGAAGCGGCATGCAAAACTGGAGCTGGATGAGAAGAGAAGGAAAAGATGGGATATTCAGAGGATCAGGGAACAAAGAATTTTACAGCGACTGCAGCTCAGAATGTATAAAAAGAAAGGAATTCAGGAATCTGAGCCTGAGGTTACCTCATTTTTCCCTGAGCCAGATGATGTTGAAAGTTTGATGATTACCCCCTTCTTGCCTGTTGTAGCATTTGGACGACCATTACCAAAATTAACTCCACAGAATTTTGAGCTACCCTGGTTGGATGAGCGTAGCCGATGCAGATTGGAGATCCAGAAGAAGCAAACACCTCACCGGACGTGTAGGAAATAG
Amino sequence
MERRMQLVKKDNEKERHKLFQGYETEEREETELSEKIKLECQPELSETSQTLPPKPFSCGRSGKGHKRKSPFGSTERKTPVKKLAPEFSKVKTKTPKHSPIKEEPCGSLSETVCKRELRSQETPEKPRSSVDTPPRLSTPQKGPSTHPKEKAFSSEIEDLPYLSTTEMYLCRWHQPPPSPLPLRESSPKKEETVARCLMPSSVAGETSVLAVPSWRDHSVEPLRDPNPSDLLENLDDSVFSKRHAKLELDEKRRKRWDIQRIREQRILQRLQLRMYKKKGIQESEPEVTSFFPEPDDVESLMITPFLPVVAFGRPLPKLTPQNFELPWLDERSRCRLEIQKKQTPHRTCRK*