ENST00000613308.4 RDM1
Information
- Transcript ID
- ENST00000613308.4
- Genome
- hg38
- Position
- chr17:35,922,478-35,930,740
- Strand
- -
- CDS length
- 711
- Amino acid length
- 237
- Gene symbol
- RDM1
- Gene type
- protein-coding
- Gene description
- RAD52 motif containing 1
- Gene Entrez Gene ID
- 201299
Variants
Display target variant
Search Word
Target data | : |
MGeND data only
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Category | : |
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Search word | : | |
Filtering | : |
Variant name | Gene | AA change | CDS | Japanese frequency |
TogoVar | MGeND | Genome | ClinVar | CIViC evidence | DisGeNET entry | COSMIC occurrence |
Prediction | |||||
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Entry | Origin | Type | Annotation | Entry | Origin | Annotation |
Search Word
Target data | : |
MGeND data only
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Category | : |
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Search word | : | |
Filtering | : |
Name | MGeND | Type | Genome | Size | Chromosome | Start | Stop | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Entry | Origin | Type | Annotation |
Search Word
Target data | : |
MGeND data only
|
Category | : |
|
Search word | : | |
Filtering | : |
Name | MGeND | Type | Genome | Gene symbol | Chromosome | Genomic start | Genomic stop | Strand | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Entry | Origin | Type | Annotation |
Exon
Exon number | Start | Stop |
---|---|---|
5 | 35,922,478 | 35,922,675 |
4 | 35,924,604 | 35,924,772 |
3 | 35,925,515 | 35,925,637 |
2 | 35,930,076 | 35,930,255 |
1 | 35,930,632 | 35,930,740 |
CDS
Exon number | Type | Start | Stop |
---|---|---|---|
5 | CDS | 35,922,533 | 35,922,675 |
4 | CDS | 35,924,604 | 35,924,772 |
3 | CDS | 35,925,515 | 35,925,637 |
2 | CDS | 35,930,076 | 35,930,255 |
1 | CDS | 35,930,632 | 35,930,727 |
Other genome
Genome | Chromosome | Start | End | Links |
---|---|---|---|---|
hg19 | chr17 | 34,249,482 | 34,257,744 | Link |
CDS sequence
ATGGCGGAGTTGGTACCTTTTGCGGTTCCCATCGAGAGTGACAAAACCTTGCTAGTGTGGGAGCTGAGCTCCGGACCCACGGCCGAGGCTTTGCATCATTCTCTGTTCACAGCATTTTCTCAGTTTGGCCTTCTGTATTCAGTCCGGGTCTTCCCAAATGCTGCAGTGGCCCATCCTGGTTTCTATGCCGTCATTAAGTTTTATTCTGCAAGGGCTGCCCACAGAGCCCAAAAGGCATGCGACCGGAAGCAGCTTTTTCAGAAATCTCCAGTCAAGGTTCGTCTTGGCACCAGACATAAGGCAGTTCAACATCAAGCCCTTGCCCTGAACAGTTCCAAATGCCAAGAACTGGCGAATTACTACTTTGGTTTCAATGGGTGTTCCAAAAGGATCATCAAGCTTCAGGAGCTTTCTGACCTTGAAGAAAGGGAAAATGAAGATAGCATGGTGCCACTTCCGAAGCAAAGCCTGAAGTTCTTCTGTGCTTTAGAAGTGGTGTTGCCATCCTGTGATTGCAGGAGTCCTGGCATTGGCTTGGTGGAGGAGCCTATGGATAAGGTGGAGGAAGGACCATTATCATTCCTTATGAAAAGGAAGACAGCCCAGAAGCTTGCTATTCAGAAGGCTTTGTCAGATGCATTCCAGAAACTGTTGATTGTTGTTCTAGGTAAGACTGTCTTGATCATCCTTGAAGTACTTCAGTTTCAGTAA
Amino sequence
MAELVPFAVPIESDKTLLVWELSSGPTAEALHHSLFTAFSQFGLLYSVRVFPNAAVAHPGFYAVIKFYSARAAHRAQKACDRKQLFQKSPVKVRLGTRHKAVQHQALALNSSKCQELANYYFGFNGCSKRIIKLQELSDLEERENEDSMVPLPKQSLKFFCALEVVLPSCDCRSPGIGLVEEPMDKVEEGPLSFLMKRKTAQKLAIQKALSDAFQKLLIVVLGKTVLIILEVLQFQ*