ENST00000279028.3 OCSTAMP

Information
Transcript ID
ENST00000279028.3
Genome
hg38
Position
chr20:46,540,946-46,550,654
Strand
-
CDS length
1,701
Amino acid length
567
Gene symbol
OCSTAMP
Gene type
protein-coding
Gene description
osteoclast stimulatory transmembrane protein
Gene Entrez Gene ID
128506
Variants

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Target data :
MGeND data only
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Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
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MGeND data only
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Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
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Target data :
MGeND data only
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Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
3 46,540,946 46,541,927
2 46,545,327 46,546,329
1 46,550,517 46,550,654
CDS
Exon number Type Start Stop
3 CDS 46,541,274 46,541,927
2 CDS 46,545,327 46,546,329
1 CDS 46,550,517 46,550,560
Other genome
Genome Chromosome Start End Links
hg19 chr20 45,169,585 45,179,293 Link
CDS sequence
ATGCCAGGCCACCCAGGAGCAGCTGAGCAACTTGTCAAGACCGGGTGGAGGTCCTGGCACTTGGGGTTCTGGAAGGCCCTTGCCCCACTGCAGGCTGCCTGGGACGCCTTCTCCCAGCCTGTTCCAGCCAGCTGTGGCCAGCTGCTGACCCAGCTCCTCCTGTGTGCCTCCCTGGCTGCTGCTGCTGCAGGTCTGGTTTATCACTGGCTGGCATCCTTGCTGCTTTATCCTCCTGGACCTTCAGCCATGGTTGCCACTGTCTGTGGCCTCCTGGTCTTCCTGAGCCTGGGCCTGGTACCCCCAGTCCGCTGCCTGTTTGCACTCAGCGTGCCCACCCTGGGTATGGAGCAGGGCCGCCGGCTGCTCCTGTCCTACAGCACTGCCACCCTGGCCATTGCTGTGGTGCCCAACGTCCTGGCCAACGTGGGTGCGGCCGGGCAGGTGCTGAGGTGTGTCACCGAGGGCTCCCTGGAGAGTCTCCTCAATACCACTCACCAGCTGCATGCAGCATCCAGGGCTCTGGGCCCCACAGGCCAGGCAGGCAGCCGGGGCCTGACATTTGAGGCCCAGGACAATGGCTCTGCCTTCTACCTTCACATGCTCAGGGTCACTCAGCAGGTCCTGGAGGATTTCTCTGGCCTGGAGTCCCTGGCCCGGGCAGCAGCGCTAGGGACCCAGCGAGTGGTCACAGGGCTGTTTATGTTGGGCCTCCTGGTGGAGTCGGCATGGTACCTCCATTGCTACCTGACAGACCTGCGGTTTGACAATATCTACGCCACTCAACAGCTGACCCAGCGGTTGGCACAGGCCCAGGCTACACACCTCCTGGCCCCTCCACCCACCTGGCTGCTCCAGGCGGCTCAGCTGAGGCTGTCACAGGAGGAGCTGTTGAGTTGTCTTCTAAGGCTGGGGCTGCTTGCCCTGCTCCTCGTGGCCACGGCTGTGGCGGTGGCCACAGACCATGTAGCCTTCCTCCTGGCACAGGCTACTGTGGACTGGGCTCAGAAGTTGCCAACTGTGCCCATCACGCTCACGGTCAAGTATGATGTGGCATACACTGTCCTGGGCTTCATCCCTTTCCTCTTCAACCAGCTGGCTCCGGAGAGCCCCTTCCTCTCCGTCCACAGCTCCTACCAATGGGAGCTCCGCCTCACCTCCGCCCGCTGCCCACTGCTACCCGCCCGGCGTCCCCGCGCAGCTGCCCCGCTGGCCGCGGGGGCCCTGCAGCTCCTGGCGGGCTCCACGGTGCTCCTGGAGGCCTACGCCCGCCGCCTGCGGCATGCCATCGCCGCTTCCTTCTTCACAGCCCAGGAGGCGAGGAGGGTCCGCCACCTGCACGCCCGGCTCCAGCGAAGACACGACAGGCACCAAGGCCAGCAGCTGCCCCTAGGGGATCCTTCTTGCGTCCCCACACCCAGACCTGCCTGCAAGCCTCCGGCATGGATAGACTACAGGCTGGATGCCTTAAGAACCGAGAGCAGTGAGGGAGAAGGGAAAGAGCTTTGGAGTTGCAGAGACCTGAGTTGTAACCTTGGTCCTGTGCCGCCTCCCTGTGTGACCTTGGGTAAGTCACTTCACCTCTCTGAGCCTCGGTTTCTACATCTGCATAACGACAGCATATTTACCATTGATGTGACCTACTTCCCACGCAGGGATGTGGTCAGGATGGAAGGAAATACTGGGCATGATAGGCCTGGATAA
Amino sequence
MPGHPGAAEQLVKTGWRSWHLGFWKALAPLQAAWDAFSQPVPASCGQLLTQLLLCASLAAAAAGLVYHWLASLLLYPPGPSAMVATVCGLLVFLSLGLVPPVRCLFALSVPTLGMEQGRRLLLSYSTATLAIAVVPNVLANVGAAGQVLRCVTEGSLESLLNTTHQLHAASRALGPTGQAGSRGLTFEAQDNGSAFYLHMLRVTQQVLEDFSGLESLARAAALGTQRVVTGLFMLGLLVESAWYLHCYLTDLRFDNIYATQQLTQRLAQAQATHLLAPPPTWLLQAAQLRLSQEELLSCLLRLGLLALLLVATAVAVATDHVAFLLAQATVDWAQKLPTVPITLTVKYDVAYTVLGFIPFLFNQLAPESPFLSVHSSYQWELRLTSARCPLLPARRPRAAAPLAAGALQLLAGSTVLLEAYARRLRHAIAASFFTAQEARRVRHLHARLQRRHDRHQGQQLPLGDPSCVPTPRPACKPPAWIDYRLDALRTESSEGEGKELWSCRDLSCNLGPVPPPCVTLGKSLHLSEPRFLHLHNDSIFTIDVTYFPRRDVVRMEGNTGHDRPG*