ENST00000536498.6 SEBOX
Information
- Transcript ID
- ENST00000536498.6
- Genome
- hg38
- Position
- chr17:28,363,506-28,365,199
- Strand
- -
- CDS length
- 573
- Amino acid length
- 191
- Gene symbol
- SEBOX
- Gene type
- protein-coding
- Gene description
- SEBOX homeobox
- Gene Entrez Gene ID
- 645832
Variants
Display target variant
Search Word
| Target data | : |
MGeND data only
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| Category | : |
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| Search word | : | |
| Filtering | : |
| Variant name | Gene | AA change | CDS | Japanese frequency |
TogoVar | MGeND | Genome | ClinVar | CIViC evidence | DisGeNET entry | COSMIC occurrence |
Prediction | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | Entry | Origin | Annotation | |||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Size | Chromosome | Start | Stop | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | ||||||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Gene symbol | Chromosome | Genomic start | Genomic stop | Strand | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | |||||||||||||||
Exon
| Exon number | Start | Stop |
|---|---|---|
| 3 | 28,363,506 | 28,364,648 |
| 2 | 28,364,795 | 28,364,955 |
| 1 | 28,365,121 | 28,365,199 |
CDS
| Exon number | Type | Start | Stop |
|---|---|---|---|
| 3 | CDS | 28,364,268 | 28,364,648 |
| 2 | CDS | 28,364,795 | 28,364,955 |
| 1 | CDS | 28,365,121 | 28,365,151 |
Other genome
| Genome | Chromosome | Start | End | Links |
|---|---|---|---|---|
| hg19 | chr17 | 26,690,528 | 26,692,221 | Link |
CDS sequence
ATGCCCAGCCCTGTGGATGCATCCTCAGCAGACGGTGGCAGCGGGTTGGGTTCCCACCGGAGAAAGCGGACCACCTTCAGCAAAGGGCAGCTACTGGAGCTGGAGAGGGCGTTTGCAGCATGGCCCTACCCCAACATCAGCACCCATGAGCACCTGGCCTGGGTCACTTGCCTTCCTGAGGCCAAGGTACAGGTGTGGTTCCAGAAGCGCTGGGCCAAAATAATCAAGAACAGGAAGTCAGGAATTCTAAGCCCTGGGTCTGAGTGCCCCCAGAGCTCCTGTTCTCTTCCAGACACCCTCCAGCAGCCCTGGGATCCCCAAATGCCAGGCCAACCTCCACCCTCCAGCGGCACACCTCAGCGCACCTCAGTGTGTCGACATAGCTCCTGTCCAGCTCCTGGCTTGAGTCCACGGCAGGGCTGGGAAGGGGCTAAAGCTGTAGCCCCATGGGGATCAGCTGGGGCTTCAGAGGTCCACCCTTCTTTAGAGCGAGCTACTCCCCAGACTTCACTAGGCAGCCTGTCTGACCTCATCTATGCCTTGGCCATTGTCGTCAATGTGGACCACTCCTAG
Amino sequence
MPSPVDASSADGGSGLGSHRRKRTTFSKGQLLELERAFAAWPYPNISTHEHLAWVTCLPEAKVQVWFQKRWAKIIKNRKSGILSPGSECPQSSCSLPDTLQQPWDPQMPGQPPPSSGTPQRTSVCRHSSCPAPGLSPRQGWEGAKAVAPWGSAGASEVHPSLERATPQTSLGSLSDLIYALAIVVNVDHS*