ENST00000221265.8 PAF1
Information
- Transcript ID
- ENST00000221265.8
- Genome
- hg38
- Position
- chr19:39,385,629-39,391,106
- Strand
- -
- CDS length
- 1,596
- Amino acid length
- 532
- Gene symbol
- PAF1
- Gene type
- protein-coding
- Gene description
- PAF1 homolog, Paf1/RNA polymerase II complex component
- Gene Entrez Gene ID
- 54623
Variants
Display target variant
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Variant name | Gene | AA change | CDS | Japanese frequency |
TogoVar | MGeND | Genome | ClinVar | CIViC evidence | DisGeNET entry | COSMIC occurrence |
Prediction | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | Entry | Origin | Annotation | |||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Size | Chromosome | Start | Stop | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | ||||||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Gene symbol | Chromosome | Genomic start | Genomic stop | Strand | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | |||||||||||||||
Exon
| Exon number | Start | Stop |
|---|---|---|
| 14 | 39,385,629 | 39,386,403 |
| 13 | 39,386,482 | 39,386,572 |
| 12 | 39,386,694 | 39,386,799 |
| 11 | 39,388,339 | 39,388,467 |
| 10 | 39,388,560 | 39,388,676 |
| 9 | 39,388,762 | 39,388,865 |
| 8 | 39,388,947 | 39,389,015 |
| 7 | 39,389,093 | 39,389,198 |
| 6 | 39,389,282 | 39,389,383 |
| 5 | 39,389,480 | 39,389,546 |
| 4 | 39,389,640 | 39,389,761 |
| 3 | 39,390,069 | 39,390,161 |
| 2 | 39,390,260 | 39,390,289 |
| 1 | 39,390,818 | 39,391,106 |
CDS
| Exon number | Type | Start | Stop |
|---|---|---|---|
| 14 | CDS | 39,385,991 | 39,386,403 |
| 13 | CDS | 39,386,482 | 39,386,572 |
| 12 | CDS | 39,386,694 | 39,386,799 |
| 11 | CDS | 39,388,339 | 39,388,467 |
| 10 | CDS | 39,388,560 | 39,388,676 |
| 9 | CDS | 39,388,762 | 39,388,865 |
| 8 | CDS | 39,388,947 | 39,389,015 |
| 7 | CDS | 39,389,093 | 39,389,198 |
| 6 | CDS | 39,389,282 | 39,389,383 |
| 5 | CDS | 39,389,480 | 39,389,546 |
| 4 | CDS | 39,389,640 | 39,389,761 |
| 3 | CDS | 39,390,069 | 39,390,161 |
| 2 | CDS | 39,390,260 | 39,390,289 |
| 1 | CDS | 39,390,818 | 39,390,864 |
Other genome
| Genome | Chromosome | Start | End | Links |
|---|---|---|---|---|
| hg19 | chr19 | 39,876,269 | 39,881,746 | Link |
CDS sequence
ATGGCGCCCACCATCCAGACCCAGGCCCAGCGGGAGGATGGCCACAGGCCCAATTCCCACCGGACTCTGCCTGAGAGGTCTGGAGTGGTCTGCCGAGTCAAGTACTGCAATAGCCTCCCTGATATCCCCTTCGACCCCAAGTTCATCACCTACCCCTTCGACCAGAACAGGTTCGTCCAGTACAAAGCCACTTCCTTGGAGAAACAGCACAAACATGACCTCCTGACTGAGCCAGACCTGGGGGTCACCATCGATCTCATCAATCCTGACACCTACCGCATCGACCCCAATGTTCTTCTAGATCCAGCTGATGAGAAACTTTTGGAAGAGGAGATTCAGGCCCCCACCAGCTCCAAGAGATCCCAGCAGCACGCGAAGGTGGTGCCATGGATGCGAAAGACAGAGTACATCTCCACTGAGTTCAACCGTTATGGCATCTCCAATGAGAAGCCTGAGGTCAAGATTGGGGTTTCTGTGAAGCAGCAGTTTACCGAGGAAGAAATATACAAAGACAGGGATAGCCAGATCACAGCCATTGAGAAGACTTTTGAGGATGCCCAGAAATCAATCTCACAGCATTACAGCAAACCCCGAGTCACACCGGTGGAGGTCATGCCTGTCTTCCCAGACTTTAAGATGTGGATCAATCCATGTGCTCAGGTGATCTTTGACTCAGACCCAGCCCCCAAGGACACGAGTGGTGCAGCTGCGTTGGAGATGATGTCTCAGGCCATGATTAGGGGCATGATGGATGAGGAAGGGAACCAGTTTGTGGCCTATTTCCTGCCTGTAGAAGAGACGTTGAAGAAACGAAAGCGGGACCAGGAGGAGGAGATGGACTATGCACCAGATGATGTGTATGACTACAAAATTGCTCGGGAGTACAACTGGAACGTGAAGAACAAAGCTAGCAAGGGCTATGAGGAAAACTACTTCTTCATCTTCCGAGAGGGTGACGGGGTTTACTACAATGAGTTGGAAACCAGGGTCCGCCTTAGTAAGCGCCGGGCCAAGGCTGGGGTTCAGTCAGGCACCAACGCCCTGCTTGTGGTCAAACATCGGGACATGAATGAGAAGGAACTGGAAGCTCAGGAGGCACGGAAGGCCCAGCTAGAAAACCACGAACCGGAGGAGGAAGAGGAAGAGGAGATGGAGACAGAAGAGAAAGAAGCTGGGGGCTCAGATGAGGAGCAGGAGAAGGGCAGCAGCAGTGAGAAGGAGGGCAGTGAAGATGAGCACTCGGGCAGCGAGAGTGAACGGGAGGAAGGTGACAGGGACGAGGCCAGTGACAAGAGTGGCAGTGGTGAGGACGAGAGCAGCGAGGATGAGGCCCGGGCTGCCCGTGACAAAGAGGAGATCTTTGGCAGTGATGCTGATTCTGAGGACGATGCCGACTCTGATGATGAGGACAGAGGACAGGCCCAAGGTGGCAGTGACAATGATTCAGACAGCGGCAGCAATGGGGGTGGCCAGCGGAGCCGGAGCCACAGCCGCAGCGCCAGTCCCTTCCCCAGTGGCAGCGAGCACTCGGCCCAGGAGGATGGCAGTGAAGCTGCAGCTTCTGATTCCAGTGAAGCTGATAGTGACAGTGACTGA
Amino sequence
MAPTIQTQAQREDGHRPNSHRTLPERSGVVCRVKYCNSLPDIPFDPKFITYPFDQNRFVQYKATSLEKQHKHDLLTEPDLGVTIDLINPDTYRIDPNVLLDPADEKLLEEEIQAPTSSKRSQQHAKVVPWMRKTEYISTEFNRYGISNEKPEVKIGVSVKQQFTEEEIYKDRDSQITAIEKTFEDAQKSISQHYSKPRVTPVEVMPVFPDFKMWINPCAQVIFDSDPAPKDTSGAAALEMMSQAMIRGMMDEEGNQFVAYFLPVEETLKKRKRDQEEEMDYAPDDVYDYKIAREYNWNVKNKASKGYEENYFFIFREGDGVYYNELETRVRLSKRRAKAGVQSGTNALLVVKHRDMNEKELEAQEARKAQLENHEPEEEEEEEMETEEKEAGGSDEEQEKGSSSEKEGSEDEHSGSESEREEGDRDEASDKSGSGEDESSEDEARAARDKEEIFGSDADSEDDADSDDEDRGQAQGGSDNDSDSGSNGGGQRSRSHSRSASPFPSGSEHSAQEDGSEAAASDSSEADSDSD*