ENST00000310942.9 CBX2

Information
Transcript ID
ENST00000310942.9
Genome
hg38
Position
chr17:79,778,148-79,787,983
Strand
+
CDS length
1,599
Amino acid length
533
Gene symbol
CBX2
Gene type
protein-coding
Gene description
chromobox 2
Gene Entrez Gene ID
84733
Variants

Display target variant


Search Word
Target data :
MGeND data only
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Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
Search Word
Target data :
MGeND data only
Category :
Search word :
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Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Search Word
Target data :
MGeND data only
Category :
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Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
1 79,778,148 79,778,307
2 79,778,384 79,778,427
3 79,779,362 79,779,427
4 79,781,696 79,781,801
5 79,783,732 79,787,983
CDS
Exon number Type Start Stop
1 CDS 79,778,236 79,778,307
2 CDS 79,778,384 79,778,427
3 CDS 79,779,362 79,779,427
4 CDS 79,781,696 79,781,801
5 CDS 79,783,732 79,785,042
Other genome
Genome Chromosome Start End Links
hg19 chr17 77,751,947 77,761,782 Link
CDS sequence
ATGGAGGAGCTGAGCAGCGTGGGCGAGCAGGTCTTCGCCGCCGAGTGCATCCTGAGCAAGCGGCTCCGCAAGGGCAAGCTGGAGTACCTGGTCAAGTGGCGCGGCTGGTCCTCCAAACATAACAGCTGGGAGCCGGAGGAGAACATCCTGGACCCGAGGCTGCTCCTGGCCTTCCAGAAGAAGGAACATGAGAAGGAGGTGCAGAACCGGAAGAGAGGCAAGAGGCCGAGAGGCCGGCCAAGGAAGCTCACTGCCATGTCCTCCTGCAGCCGGCGCTCCAAGCTCAAGGAACCCGATGCTCCCTCCAAATCCAAGTCCAGCAGTTCCTCCTCTTCCTCCACGTCATCCTCCTCTTCCTCAGATGAAGAGGATGACAGTGACTTAGATGCTAAGAGGGGTCCCCGGGGCCGCGAGACCCACCCAGTGCCGCAGAAGAAGGCCCAGATCCTGGTGGCCAAACCCGAGCTGAAGGATCCCATCCGGAAGAAGCGGGGACGAAAGCCCCTGCCCCCAGAGCAAAAGGCAACCCGAAGACCCGTGAGCCTGGCCAAGGTGCTGAAGACCGCCCGGAAGGATCTGGGGGCCCCGGCCAGCAAGCTGCCCCCTCCACTCAGCGCCCCCGTTGCAGGCCTGGCAGCTCTGAAGGCCCACGCCAAGGAGGCCTGTGGCGGCCCCAGTGCCATGGCCACCCCAGAGAACCTGGCCAGCCTAATGAAGGGCATGGCCAGTAGCCCCGGCCGGGGTGGCATCAGCTGGCAGAGCTCCATCGTGCACTACATGAACCGGATGACCCAGAGCCAGGCCCAGGCTGCCAGCAGGTTGGCGCTGAAGGCCCAGGCCACCAACAAGTGCGGCCTCGGGCTGGACCTGAAGGTGAGGACGCAGAAAGGGGAGCTGGGAATGAGCCCTCCAGGAAGCAAAATCCCGAAGGCCCCCAGCGGTGGGGCTGTGGAGCAGAAAGTGGGGAACACAGGGGGCCCCCCGCACACCCATGGTGCCAGCAGGGTGCCTGCTGGGTGCCCAGGCCCCCAGCCAGCACCCACCCAGGAGCTGAGCCTCCAGGTCTTGGACTTGCAGAGTGTCAAGAATGGCATGCCCGGGGTGGGTCTCCTTGCCCGCCACGCCACCGCCACCAAGGGTGTCCCGGCCACCAACCCAGCCCCTGGGAAGGGCACTGGGAGTGGCCTCATTGGGGCCAGCGGGGCCACCATGCCCACCGACACAAGCAAAAGTGAGAAGCTGGCTTCCAGAGCAGTGGCGCCACCCACCCCTGCCAGCAAGAGGGACTGTGTCAAGGGCAGTGCTACCCCCAGTGGGCAGGAGAGCCGCACAGCCCCCGGAGAAGCCCGCAAGGCGGCCACACTGCCAGAGATGAGCGCAGGTGAGGAGAGTAGCAGCTCGGACTCCGACCCCGACTCCGCCTCGCCGCCCAGCACTGGACAGAACCCGTCAGTGTCCGTTCAGACCAGCCAGGACTGGAAGCCCACCCGCAGCCTCATCGAGCACGTATTTGTCACCGACGTCACTGCCAACCTCATCACCGTCACAGTGAAGGAGTCTCCCACCAGCGTGGGCTTCTTCAACCTGAGGCATTACTGA
Amino sequence
MEELSSVGEQVFAAECILSKRLRKGKLEYLVKWRGWSSKHNSWEPEENILDPRLLLAFQKKEHEKEVQNRKRGKRPRGRPRKLTAMSSCSRRSKLKEPDAPSKSKSSSSSSSSTSSSSSSDEEDDSDLDAKRGPRGRETHPVPQKKAQILVAKPELKDPIRKKRGRKPLPPEQKATRRPVSLAKVLKTARKDLGAPASKLPPPLSAPVAGLAALKAHAKEACGGPSAMATPENLASLMKGMASSPGRGGISWQSSIVHYMNRMTQSQAQAASRLALKAQATNKCGLGLDLKVRTQKGELGMSPPGSKIPKAPSGGAVEQKVGNTGGPPHTHGASRVPAGCPGPQPAPTQELSLQVLDLQSVKNGMPGVGLLARHATATKGVPATNPAPGKGTGSGLIGASGATMPTDTSKSEKLASRAVAPPTPASKRDCVKGSATPSGQESRTAPGEARKAATLPEMSAGEESSSSDSDPDSASPPSTGQNPSVSVQTSQDWKPTRSLIEHVFVTDVTANLITVTVKESPTSVGFFNLRHY*