ENST00000539382.5 CTCFL

Information
Transcript ID
ENST00000539382.5
Genome
hg38
Position
chr20:57,506,742-57,525,107
Strand
-
CDS length
1,269
Amino acid length
423
Gene symbol
CTCFL
Gene type
protein-coding
Gene description
CCCTC-binding factor like
Gene Entrez Gene ID
140690
Variants

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Target data :
MGeND data only
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Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
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Target data :
MGeND data only
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Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Search Word
Target data :
MGeND data only
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Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
9 57,506,742 57,507,792
8 57,508,606 57,508,788
7 57,512,592 57,512,752
6 57,514,592 57,514,741
5 57,515,714 57,515,834
4 57,518,758 57,518,891
3 57,519,207 57,519,377
2 57,523,068 57,523,278
1 57,525,028 57,525,107
CDS
Exon number Type Start Stop
9 CDS 57,507,583 57,507,792
8 CDS 57,508,606 57,508,788
7 CDS 57,512,592 57,512,752
6 CDS 57,514,592 57,514,741
5 CDS 57,515,714 57,515,834
4 CDS 57,518,758 57,518,891
3 CDS 57,519,207 57,519,377
2 CDS 57,523,068 57,523,206
Other genome
Genome Chromosome Start End Links
hg19 chr20 56,081,798 56,100,163 Link
CDS sequence
ATGTCAGGAGATGAAAGAAGTGACGAAATTGTTCTCACAGTTTCAAATTCAAATGTGGAAGAACAAGAGGATCAACCTACAGCTGGTCAAGCAGATGCTGAAAAGGCCAAATCTACAAAAAATCAAAGAAAGACAAAGGGAGCAAAAGGAACCTTCCACTGTGATGTCTGCATGTTCACCTCTTCTAGAATGTCAAGTTTTAATCGTCATATGAAAACTCACACCAGTGAGAAGCCTCACCTGTGTCACCTCTGCCTGAAAACCTTCCGTACGGTCACTCTGCTGCGGAACCATGTTAACACCCACACAGGAACCAGGCCCTACAAGTGTAACGACTGCAACATGGCATTTGTCACCAGTGGAGAACTCGTCCGACACAGGCGCTATAAACATACTCATGAGAAACCCTTTAAATGTTCCATGTGCAAGTATGCCAGTGTGGAGGCAAGTAAATTGAAGCGCCATGTCCGATCCCACACTGGGGAGCGCCCCTTTCAGTGTTGCCAGTGCAGCTATGCCAGCAGAGATACCTACAAGCTGAAACGCCACATGAGAACGCACTCAGGTGAGAAGCCTTACGAATGCCACATCTGCCACACCCGCTTCACCCAGAGCGGGACCATGAAAATACATATTCTGCAGAAACACGGCGAAAATGTCCCCAAATACCAGTGTCCCCATTGTGCCACCATCATTGCACGGAAAAGCGACCTACGTGTGCATATGCGCAACTTGCATGCTTACAGCGCTGCAGAGCTGAAATGCCGCTACTGTTCTGCTGTCTTCCATGAACGCTATGCCCTCATTCAGCACCAGAAAACTCATAAGAATGAGAAGAGGTTCAAGTGCAAACACTGCAGTTATGCCTGCAAGCAGGAACGTCATATGACCGCTCACATTCGTACCCACACTGGAGAGAAACCATTCACCTGCCTTTCTTGCAATAAATGTTTCCGACAGAAGCAACTTCTAAACGCTCACTTCAGGAAATACCACGATGCAAATTTCATCCCGACTGTTTACAAATGCTCCAAGTGTGGCAAAGGCTTTTCCCGCTGGATTCTCTGGGTTGGGAACTCGGAAGTGGCTGAACTGGGTGGTCCTGGCTCAGGGCCACTCCTGAGGCTGCAGTCAGGATGTCCGCCAGGGCTGCATCATCCGAAGGCTGGACTGGGGCCAGAGGATCCACTTCCAGGACAGCTCCGCCACACAACTGCTGGCACCGGCCTCAGTTCCTTGCTACAGGGACCTCTCTGCAGGGCTGCTTGA
Amino sequence
MSGDERSDEIVLTVSNSNVEEQEDQPTAGQADAEKAKSTKNQRKTKGAKGTFHCDVCMFTSSRMSSFNRHMKTHTSEKPHLCHLCLKTFRTVTLLRNHVNTHTGTRPYKCNDCNMAFVTSGELVRHRRYKHTHEKPFKCSMCKYASVEASKLKRHVRSHTGERPFQCCQCSYASRDTYKLKRHMRTHSGEKPYECHICHTRFTQSGTMKIHILQKHGENVPKYQCPHCATIIARKSDLRVHMRNLHAYSAAELKCRYCSAVFHERYALIQHQKTHKNEKRFKCKHCSYACKQERHMTAHIRTHTGEKPFTCLSCNKCFRQKQLLNAHFRKYHDANFIPTVYKCSKCGKGFSRWILWVGNSEVAELGGPGSGPLLRLQSGCPPGLHHPKAGLGPEDPLPGQLRHTTAGTGLSSLLQGPLCRAA*