ENST00000541594.5 TMEM106A

Information
Transcript ID
ENST00000541594.5
Genome
hg38
Position
chr17:43,211,875-43,218,249
Strand
+
CDS length
645
Amino acid length
215
Gene symbol
TMEM106A
Gene type
protein-coding
Gene description
transmembrane protein 106A
Gene Entrez Gene ID
113277
Variants

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MGeND data only
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Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
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MGeND data only
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Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
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MGeND data only
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Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
1 43,211,875 43,211,922
2 43,212,227 43,212,394
3 43,213,021 43,213,045
4 43,213,190 43,213,252
5 43,213,828 43,213,891
6 43,215,788 43,215,941
7 43,216,449 43,216,589
8 43,216,697 43,216,740
9 43,217,259 43,217,312
10 43,217,681 43,218,249
CDS
Exon number Type Start Stop
3 CDS 43,213,042 43,213,045
4 CDS 43,213,190 43,213,252
5 CDS 43,213,828 43,213,891
6 CDS 43,215,788 43,215,941
7 CDS 43,216,449 43,216,589
8 CDS 43,216,697 43,216,740
9 CDS 43,217,259 43,217,312
10 CDS 43,217,681 43,217,801
Other genome
Genome Chromosome Start End Links
hg19 chr17 41,363,894 41,370,268 Link
CDS sequence
ATGGGAACTGCTGATGCCAGCTTCGTGACTTGTCCCACCTGCCAGGGCAGTGGCAAGATTCCCCAAGAGCTGGAGAAGCAGTTGGTGGCTCTCATTCCCTATGGGGACCAGAGGCTGAAGCCCAAGCACACGAAGCTCTTTGTGTTCCTGGCCGTGCTCATCTGCCTGGTGACCTCCTCCTTCATCGTCTTTTTCCTGTTTCCCCGGTCCGTCATTGTGCAGCCTGCAGGCCTCAACTCCTCCACAGTGGCCTTTGATGAGGCTGATATCTACCTCAACATAACGAATATCTTAAACATCTCCAATGGCAACTACTACCCCATTATGGTGACACAGCTGACCCTCGAGGTTCTGCACCTGTCCCTCGTGGTGGGGCAGGTTTCCAACAACCTTCTCCTACACATTGGCCCTTTGGCCAGTGAACAGATGTTTTACGCAGTAGCTACCAAGATACGGGATGAAAACACATACAAAATCTGTACCTGGCTGGAAATCAAAGTCCACCATGTGCTTTTGCACATCCAGGGCACCCTGACCTGTTCATACCTGAGCCATTCAGAGCAGCTGGTCTTTCAGAGCTATGAATATGTGGACTGCCGAGGAAACGCATCTGTGCCCCACCAGCTGACCCCTCACCCACCATGA
Amino sequence
MGTADASFVTCPTCQGSGKIPQELEKQLVALIPYGDQRLKPKHTKLFVFLAVLICLVTSSFIVFFLFPRSVIVQPAGLNSSTVAFDEADIYLNITNILNISNGNYYPIMVTQLTLEVLHLSLVVGQVSNNLLLHIGPLASEQMFYAVATKIRDENTYKICTWLEIKVHHVLLHIQGTLTCSYLSHSEQLVFQSYEYVDCRGNASVPHQLTPHPP*