ENST00000538596.6 CPNE8
Information
- Transcript ID
- ENST00000538596.6
- Genome
- hg38
- Position
- chr12:38,652,358-38,721,222
- Strand
- -
- CDS length
- 702
- Amino acid length
- 234
- Gene symbol
- CPNE8
- Gene type
- protein-coding
- Gene description
- copine 8
- Gene Entrez Gene ID
- 144402
Variants
Display target variant
Search Word
| Target data | : |
MGeND data only
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| Category | : |
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| Search word | : | |
| Filtering | : |
| Variant name | Gene | AA change | CDS | Japanese frequency |
TogoVar | MGeND | Genome | ClinVar | CIViC evidence | DisGeNET entry | COSMIC occurrence |
Prediction | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | Entry | Origin | Annotation | |||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
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| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Size | Chromosome | Start | Stop | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | ||||||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Gene symbol | Chromosome | Genomic start | Genomic stop | Strand | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | |||||||||||||||
Exon
| Exon number | Start | Stop |
|---|---|---|
| 8 | 38,652,358 | 38,654,070 |
| 7 | 38,670,729 | 38,670,802 |
| 6 | 38,675,717 | 38,675,774 |
| 5 | 38,677,452 | 38,677,554 |
| 4 | 38,685,490 | 38,685,617 |
| 3 | 38,693,657 | 38,693,838 |
| 2 | 38,702,875 | 38,702,921 |
| 1 | 38,720,653 | 38,721,222 |
CDS
| Exon number | Type | Start | Stop |
|---|---|---|---|
| 8 | CDS | 38,653,882 | 38,654,070 |
| 7 | CDS | 38,670,729 | 38,670,802 |
| 6 | CDS | 38,675,717 | 38,675,774 |
| 5 | CDS | 38,677,452 | 38,677,554 |
| 4 | CDS | 38,685,490 | 38,685,617 |
| 3 | CDS | 38,693,657 | 38,693,806 |
Other genome
| Genome | Chromosome | Start | End | Links |
|---|---|---|---|---|
| hg19 | chr12 | 39,046,160 | 39,115,024 | Link |
CDS sequence
ATGAATCCTTACCAACTGAATGCCTATGGTATGGCACTAAAAGCAGTGGGAGAAATTGTTCAAGATTATGACAGTGATAAAATGTTTCCAGCTCTAGGATTTGGTGCAAAACTGCCTCCAGATGGAAGGATATCTCACGAATTTGCTTTGAATGGGAATCCTCAAAACCCCTACTGTGATGGCATTGAGGGGGTCATGGAGGCTTATTACAGGAGTCTGAAATCTGTACAACTATATGGGCCCACCAACTTTGCTCCTGTAATTAATCATGTAGCAAGATATGCTTCTTCTGTAAAGGATGGCTCCCAGTATTTTGTGCTTCTGATTGTTACAGATGGTGTTATCTCAGATATGGCCCAGACTAAGGAGTCCATAGTTAATGCCTCAAAACTTCCAATGTCAATAATTATAGTAGGTGTTGGACCAGCAGAATTTGATGCAATGGTCGAATTGGATGGAGATGATGTAAGAGTCTCCTCTAGAGGAAAATATGCTGAAAGAGACATTGTGCAGTTTGTGCCATTCAGGGATTATATTGACAGAAGTGGAAACCACATACTGAGCATGGCTAGATTGGCTAAAGATGTCCTAGCTGAGATCCCTGAGCAGTTTCTCTCCTATATGAGAGCCCGAGGAATCAAGCCATCACCTGCGCCTCCCCCATACACCCCACCTACACATGTGTTACAGACTCAAATATGA
Amino sequence
MNPYQLNAYGMALKAVGEIVQDYDSDKMFPALGFGAKLPPDGRISHEFALNGNPQNPYCDGIEGVMEAYYRSLKSVQLYGPTNFAPVINHVARYASSVKDGSQYFVLLIVTDGVISDMAQTKESIVNASKLPMSIIIVGVGPAEFDAMVELDGDDVRVSSRGKYAERDIVQFVPFRDYIDRSGNHILSMARLAKDVLAEIPEQFLSYMRARGIKPSPAPPPYTPPTHVLQTQI*