ENST00000544474.5 PDZD4

Information
Transcript ID
ENST00000544474.5
Genome
hg38
Position
chrX:153,802,168-153,830,548
Strand
-
CDS length
1,983
Amino acid length
661
Gene symbol
PDZD4
Gene type
protein-coding
Gene description
PDZ domain containing 4
Gene Entrez Gene ID
57595
Variants

Display target variant


Search Word
Target data :
MGeND data only
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Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
Search Word
Target data :
MGeND data only
Category :
Search word :
Filtering :
Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Search Word
Target data :
MGeND data only
Category :
Search word :
Filtering :
Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
6 153,802,168 153,804,900
5 153,805,097 153,805,207
4 153,805,505 153,805,606
3 153,806,071 153,806,133
2 153,806,742 153,806,840
1 153,830,239 153,830,548
CDS
Exon number Type Start Stop
6 CDS 153,803,353 153,804,900
5 CDS 153,805,097 153,805,207
4 CDS 153,805,505 153,805,606
3 CDS 153,806,071 153,806,133
2 CDS 153,806,742 153,806,840
1 CDS 153,830,239 153,830,298
Other genome
Genome Chromosome Start End Links
hg19 chrX 153,067,623 153,096,003 Link
CDS sequence
ATGGGATGTAATATGTGCGTGGTCCAGAAACCGGAGGAGCAGTACAAAGTGATGCTGCAGGAGGTGGAGCTGTATAAAAGCAGCCACCGGGACAAGCTGGGCCTGATGGTTTGCTACCGCACGGACGACGAGGAGGACCTGGGCATTTATGTCGGAGAGGTAAATCCCAACAGCATTGCAGCCAAAGACGGCCGGATCCGTGAGGGAGACCGCATCATCCAGATTAACGGTGTAGACGTCCAGAACCGGGAAGAGGCGGTGGCCATCCTGAGCCAGGAAGAGAACACCAACATCTCCCTGCTGGTGGCCCGACCTGAGAGTCAGCTGGCGAAAAGGTGGAAGGACAGCGACCGGGATGACTTCCTGGATGACTTTGGCTCTGAGAATGAGGGGGAGCTGCGTGCTCGTAAACTGAAATCACCCCCTGCCCAGCAGCCCGGAAACGAAGAGGAGAAGGGGGCTCCCGATGCCGGCCCAGGCCTGAGCAACAGCCAGGAGCTGGACAGCGGGGTGGGCCGGACTGACGAGAGCACCCGGAACGAAGAGAGCTCTGAGCACGACCTGCTGGGGGACGAACCCCCGAGCTCCACCAACACCCCGGGAAGCCTGCGCAAGTTTGGCCTGCAAGGGGACGCCCTGCAGAGCCGGGACTTCCATTTCAGCATGGACTCTCTGCTGGCCGAGGGGGCGGGGCTGGGAGGGGGCGACGTCCCGGGCCTCACGGATGAGGAGTATGAGCGCTACCGTGAGCTCCTGGAGATCAAGTGCCACCTGGAGAACGGCAACCAGCTGGGCCTCCTCTTTCCCCGGGCCTCCGGAGGCAACAGCGCCCTGGACGTCAACCGCAACGAGAGCCTGGGCCACGAGATGGCCATGCTGGAGGAGGAGCTAAGGCACCTGGAATTCAAGTGCCGCAACATACTGCGGGCGCAGAAGATGCAGCAGCTGCGTGAGCGCTGCATGAAGGCCTGGCTGCTGGAGGAGGAGAGCCTCTACGACCTGGCGGCCAGCGAGCCCAAGAAGCACGAGCTGTCCGACATCTCCGAGCTGCCCGAGAAGTCGGACAAGGACAGCACCAGCGCCTACAACACTGGGGAGAGCTGCCGCAGCACCCCGCTGCTTGTGGAGCCCCTGCCCGAGAGCCCCCTGCGGCGGGCCATGGCCGGCAACTCCAACTTGAACCGGACCCCTCCCGGCCCCGCTGTTGCCACCCCCGCCAAGGCAGCTCCTCCACCGGGGAGCCCCGCCAAGTTCCGGTCCCTCTCCCGGGATCCTGAGGCCGGCCGGAGGCAGCACGCGGAGGAGCGCGGCCGCCGCAACCCCAAGACGGGGTTGACCCTGGAGCGTGTGGGCCCTGAAAGCAGCCCTTACCTCTCGCGGCGCCACCGCGGCCAGGGCCAGGAGGGCGAGCACTACCACAGCTGCGTGCAGCTGGCCCCGACGCGAGGCCTGGAGGAGCTGGGCCACGGCCCCCTGAGCTTGGCCGGTGGCCCTCGGGTGGGCGGGGTGGCGGCCGCGGCCACTGAAGCACCGCGCATGGAGTGGAAAGTGAAGGTGCGCAGCGACGGAACCCGCTACGTGGCCAAGCGGCCCGTGCGAGATCGGCTGCTGAAAGCCCGTGCCCTGAAGATCCGGGAGGAGCGCAGCGGTATGACGACCGACGACGACGCGGTGAGCGAGATGAAGATGGGCCGCTACTGGAGCAAGGAGGAGCGGAAGCAGCACCTGATCCGGGCCCGTGAGCAGCGGAAGCGGCGCGAGTTCATGATGCAGAGCCGGCTGGAGTGCCTGCGGGAGCAGCAGAATGGCGACAGCAAGCCCGAGCTCAACATCATTGCCCTGAGCCACCGCAAAACCATGAAGAAGCGGAACAAGAAGATCCTGGACAACTGGATCACCATCCAGGAGATGCTGGCCCACGGCGCGCGCTCCGCCGATGGCAAGCGGGTCTACAACCCTCTTCTCTCAGTCACCACCGTGTGA
Amino sequence
MGCNMCVVQKPEEQYKVMLQEVELYKSSHRDKLGLMVCYRTDDEEDLGIYVGEVNPNSIAAKDGRIREGDRIIQINGVDVQNREEAVAILSQEENTNISLLVARPESQLAKRWKDSDRDDFLDDFGSENEGELRARKLKSPPAQQPGNEEEKGAPDAGPGLSNSQELDSGVGRTDESTRNEESSEHDLLGDEPPSSTNTPGSLRKFGLQGDALQSRDFHFSMDSLLAEGAGLGGGDVPGLTDEEYERYRELLEIKCHLENGNQLGLLFPRASGGNSALDVNRNESLGHEMAMLEEELRHLEFKCRNILRAQKMQQLRERCMKAWLLEEESLYDLAASEPKKHELSDISELPEKSDKDSTSAYNTGESCRSTPLLVEPLPESPLRRAMAGNSNLNRTPPGPAVATPAKAAPPPGSPAKFRSLSRDPEAGRRQHAEERGRRNPKTGLTLERVGPESSPYLSRRHRGQGQEGEHYHSCVQLAPTRGLEELGHGPLSLAGGPRVGGVAAAATEAPRMEWKVKVRSDGTRYVAKRPVRDRLLKARALKIREERSGMTTDDDAVSEMKMGRYWSKEERKQHLIRAREQRKRREFMMQSRLECLREQQNGDSKPELNIIALSHRKTMKKRNKKILDNWITIQEMLAHGARSADGKRVYNPLLSVTTV*