ENST00000367929.3 SH2D1B
Information
- Transcript ID
- ENST00000367929.3
- Genome
- hg38
- Position
- chr1:162,395,268-162,412,136
- Strand
- -
- CDS length
- 399
- Amino acid length
- 133
- Gene symbol
- SH2D1B
- Gene type
- protein-coding
- Gene description
- SH2 domain containing 1B
- Gene Entrez Gene ID
- 117157
Variants
Display target variant
Search Word
Target data | : |
MGeND data only
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Category | : |
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Filtering | : |
Variant name | Gene | AA change | CDS | Japanese frequency |
TogoVar | MGeND | Genome | ClinVar | CIViC evidence | DisGeNET entry | COSMIC occurrence |
Prediction | |||||
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Entry | Origin | Type | Annotation | Entry | Origin | Annotation |
Search Word
Target data | : |
MGeND data only
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Category | : |
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Search word | : | |
Filtering | : |
Name | MGeND | Type | Genome | Size | Chromosome | Start | Stop | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Entry | Origin | Type | Annotation |
Search Word
Target data | : |
MGeND data only
|
Category | : |
|
Search word | : | |
Filtering | : |
Name | MGeND | Type | Genome | Gene symbol | Chromosome | Genomic start | Genomic stop | Strand | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
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Entry | Origin | Type | Annotation |
Exon
Exon number | Start | Stop |
---|---|---|
4 | 162,395,268 | 162,397,315 |
3 | 162,398,923 | 162,399,087 |
2 | 162,402,739 | 162,402,802 |
1 | 162,411,883 | 162,412,136 |
CDS
Exon number | Type | Start | Stop |
---|---|---|---|
4 | CDS | 162,397,280 | 162,397,315 |
3 | CDS | 162,398,923 | 162,399,087 |
2 | CDS | 162,402,739 | 162,402,802 |
1 | CDS | 162,411,883 | 162,412,016 |
Other genome
Genome | Chromosome | Start | End | Links |
---|---|---|---|---|
hg19 | chr1 | 162,365,058 | 162,381,926 | Link |
CDS sequence
ATGGATCTGCCTTACTACCATGGACGTCTGACCAAGCAAGACTGTGAGACCTTGCTGCTCAAGGAAGGGGTGGATGGCAACTTTCTTTTAAGAGACAGCGAGTCGATACCAGGAGTCCTGTGCCTCTGTGTCTCGTTTAAAAATATTGTCTACACATACCGAATCTTCAGAGAGAAACACGGGTATTACAGGATACAGACTGCAGAAGGTTCTCCAAAACAGGTCTTTCCAAGCCTAAAGGAACTGATCTCCAAATTTGAAAAACCAAATCAGGGGATGGTGGTTCACCTTTTAAAGCCAATAAAGAGAACCAGCCCCAGCTTGAGATGGAGAGGATTGAAATTAGAGTTGGAAACATTTGTGAACAGTAACAGCGATTATGTGGATGTCTTGCCTTGA
Amino sequence
MDLPYYHGRLTKQDCETLLLKEGVDGNFLLRDSESIPGVLCLCVSFKNIVYTYRIFREKHGYYRIQTAEGSPKQVFPSLKELISKFEKPNQGMVVHLLKPIKRTSPSLRWRGLKLELETFVNSNSDYVDVLP*