ENST00000005386.8 RPAP3

Information
Transcript ID
ENST00000005386.8
Genome
hg38
Position
chr12:47,661,249-47,706,030
Strand
-
CDS length
1,998
Amino acid length
666
Gene symbol
RPAP3
Gene type
protein-coding
Gene description
RNA polymerase II associated protein 3
Gene Entrez Gene ID
79657
Variants

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Target data :
MGeND data only
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Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
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Target data :
MGeND data only
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Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
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Target data :
MGeND data only
Category :
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Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
17 47,661,249 47,663,590
16 47,666,980 47,667,080
15 47,667,754 47,667,851
14 47,668,916 47,669,102
13 47,670,107 47,670,345
12 47,679,493 47,679,594
11 47,679,704 47,679,774
10 47,681,696 47,681,817
9 47,686,780 47,686,907
8 47,687,876 47,688,001
7 47,689,125 47,689,195
6 47,690,518 47,690,639
5 47,696,276 47,696,403
4 47,697,597 47,697,719
3 47,701,464 47,701,604
2 47,702,688 47,702,846
1 47,705,952 47,706,030
CDS
Exon number Type Start Stop
17 CDS 47,663,505 47,663,590
16 CDS 47,666,980 47,667,080
15 CDS 47,667,754 47,667,851
14 CDS 47,668,916 47,669,102
13 CDS 47,670,107 47,670,345
12 CDS 47,679,493 47,679,594
11 CDS 47,679,704 47,679,774
10 CDS 47,681,696 47,681,817
9 CDS 47,686,780 47,686,907
8 CDS 47,687,876 47,688,001
7 CDS 47,689,125 47,689,195
6 CDS 47,690,518 47,690,639
5 CDS 47,696,276 47,696,403
4 CDS 47,697,597 47,697,719
3 CDS 47,701,464 47,701,604
2 CDS 47,702,688 47,702,840
Other genome
Genome Chromosome Start End Links
hg19 chr12 48,055,032 48,099,813 Link
CDS sequence
ATGACTTCAGCAAATAAAGCAATCGAATTACAACTACAAGTGAAACAAAATGCAGAAGAATTACAAGACTTTATGCGGGATTTAGAAAACTGGGAAAAAGACATTAAACAAAAGGATATGGAACTAAGAAGACAGAATGGTGTTCCTGAAGAGAATTTACCTCCTATTCGAAATGGGAATTTTAGGAAAAAGAAGAAAGGCAAAGCTAAAGAGTCTTCCAAAAAAACCAGAGAGGAAAACACAAAAAACAGGATAAAATCTTATGATTATGAGGCATGGGCAAAACTTGATGTGGACCGTATCCTTGATGAGCTTGACAAAGACGATAGTACCCATGAGTCTCTGTCTCAAGAATCAGAGTCGGAAGAAGATGGGATTCATGTAGATTCACAAAAGGCTCTTGTTTTAAAAGAAAAGGGCAATAAATACTTCAAACAAGGAAAATATGATGAAGCAATTGACTGCTACACAAAAGGCATGGATGCCGATCCATATAATCCCGTGTTGCCAACGAACAGAGCGTCAGCATATTTTAGACTGAAAAAATTTGCTGTTGCTGAGTCTGATTGTAATTTAGCAGTTGCCTTGAATAGAAGTTATACAAAGGCTTATTCCAGACGAGGTGCTGCTCGATTTGCTTTGCAAAAATTAGAAGAGGCCAAAAAAGATTATGAAAGAGTATTAGAACTAGAACCAAATAACTTTGAAGCAACAAATGAACTCAGGAAAATCAGTCAGGCTTTAGCATCCAAAGAAAACTCATATCCAAAGGAAGCTGACATAGTGATTAAGTCAACAGAAGGAGAGCGAAAGCAAATTGAAGCACAACAGAATAAGCAGCAGGCCATTTCAGAGAAAGATCGGGGGAATGGATTTTTCAAAGAGGGGAAATATGAAAGAGCAATTGAATGCTATACTCGAGGGATAGCAGCAGATGGTGCTAATGCCCTTCTTCCAGCTAACAGAGCTATGGCCTATCTGAAGATTCAGAAATATGAAGAAGCTGAAAAAGACTGCACACAAGCCATTTTATTAGATGGCTCATATTCTAAAGCTTTTGCCAGAAGAGGAACTGCAAGAACATTTTTGGGAAAGCTAAATGAGGCAAAACAAGATTTTGAAACTGTTTTACTTCTGGAACCTGGAAATAAGCAAGCAGTAACTGAACTCTCCAAAATTAAAAAGGAATTAATTGAGAAAGGACACTGGGATGATGTCTTTCTTGATTCCACACAAAGACAAAATGTGGTAAAACCCATTGATAATCCACCGCATCCTGGATCAACTAAACCACTCAAGAAGGTTATTATTGAAGAAACTGGTAATTTGATACAGACTATTGATGTGCCAGATAGCACTACTGCTGCTGCTCCAGAGAATAATCCTATTAATCTAGCAAATGTAATAGCAGCCACAGGCACCACAAGTAAGAAGAATTCAAGCCAAGATGACCTTTTTCCCACAAGTGATACTCCAAGAGCAAAAGTATTGAAAATAGAAGAAGTCAGTGATACTTCATCCCTGCAACCTCAAGCCAGTTTGAAGCAGGATGTATGTCAGTCTTACAGCGAGAAAATGCCCATAGAGATAGAACAAAAACCTGCTCAGTTTGCCACAACTGTTCTTCCTCCAATTCCTGCAAACTCGTTCCAGCTCGAATCTGATTTCAGACAATTGAAAAGTTCTCCAGATATGTTGTATCAGTATTTAAAGCAAATTGAACCATCTTTGTATCCTAAGTTGTTTCAGAAAAATCTGGATCCAGATGTATTCAACCAGATCGTTAAAATTCTGCATGACTTTTACATTGAGAAAGAAAAGCCATTACTCATCTTTGAAATCTTACAAAGACTTTCTGAACTAAAAAGGTTTGATATGGCAGTGATGTTTATGTCAGAAACAGAGAAAAAGATTGCACGTGCATTATTTAATCACATAGACAAGTCAGGATTGAAGGATAGTTCTGTCGAAGAACTCAAGAAAAGATACGGTGGTTGA
Amino sequence
MTSANKAIELQLQVKQNAEELQDFMRDLENWEKDIKQKDMELRRQNGVPEENLPPIRNGNFRKKKKGKAKESSKKTREENTKNRIKSYDYEAWAKLDVDRILDELDKDDSTHESLSQESESEEDGIHVDSQKALVLKEKGNKYFKQGKYDEAIDCYTKGMDADPYNPVLPTNRASAYFRLKKFAVAESDCNLAVALNRSYTKAYSRRGAARFALQKLEEAKKDYERVLELEPNNFEATNELRKISQALASKENSYPKEADIVIKSTEGERKQIEAQQNKQQAISEKDRGNGFFKEGKYERAIECYTRGIAADGANALLPANRAMAYLKIQKYEEAEKDCTQAILLDGSYSKAFARRGTARTFLGKLNEAKQDFETVLLLEPGNKQAVTELSKIKKELIEKGHWDDVFLDSTQRQNVVKPIDNPPHPGSTKPLKKVIIEETGNLIQTIDVPDSTTAAAPENNPINLANVIAATGTTSKKNSSQDDLFPTSDTPRAKVLKIEEVSDTSSLQPQASLKQDVCQSYSEKMPIEIEQKPAQFATTVLPPIPANSFQLESDFRQLKSSPDMLYQYLKQIEPSLYPKLFQKNLDPDVFNQIVKILHDFYIEKEKPLLIFEILQRLSELKRFDMAVMFMSETEKKIARALFNHIDKSGLKDSSVEELKKRYGG*