ENST00000344839.3 BSPH1
Information
- Transcript ID
- ENST00000344839.3
- Genome
- hg38
- Position
- chr19:47,968,046-47,992,170
- Strand
- -
- CDS length
- 399
- Amino acid length
- 133
- Gene symbol
- BSPH1
- Gene type
- protein-coding
- Gene description
- binder of sperm protein homolog 1
- Gene Entrez Gene ID
- 100131137
Variants
Display target variant
Search Word
| Target data | : |
MGeND data only
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| Category | : |
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| Variant name | Gene | AA change | CDS | Japanese frequency |
TogoVar | MGeND | Genome | ClinVar | CIViC evidence | DisGeNET entry | COSMIC occurrence |
Prediction | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | Entry | Origin | Annotation | |||||||||||
Search Word
| Target data | : |
MGeND data only
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| Category | : |
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| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Size | Chromosome | Start | Stop | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | ||||||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Gene symbol | Chromosome | Genomic start | Genomic stop | Strand | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | |||||||||||||||
Exon
| Exon number | Start | Stop |
|---|---|---|
| 6 | 47,968,046 | 47,968,209 |
| 5 | 47,976,710 | 47,976,854 |
| 4 | 47,977,373 | 47,977,504 |
| 3 | 47,979,570 | 47,979,599 |
| 2 | 47,980,921 | 47,980,941 |
| 1 | 47,992,009 | 47,992,170 |
CDS
| Exon number | Type | Start | Stop |
|---|---|---|---|
| 5 | CDS | 47,976,712 | 47,976,854 |
| 4 | CDS | 47,977,373 | 47,977,504 |
| 3 | CDS | 47,979,570 | 47,979,599 |
| 2 | CDS | 47,980,921 | 47,980,941 |
| 1 | CDS | 47,992,009 | 47,992,081 |
Other genome
| Genome | Chromosome | Start | End | Links |
|---|---|---|---|---|
| hg19 | chr19 | 48,471,303 | 48,495,427 | Link |
CDS sequence
ATGGGCTCCCTGATGCTTCTCTTCGTGGAAACGACGCGAAATTCCTCAGCTTGCATCTTCCCTGTTATTTTAAATGAATTATCATCAACTGTGGAAACTATAACTCATTTTCCAGAAGTTACAGATGGGGAGTGTGTCTTTCCATTCCACTATAAAAATGGAACATATTATGACTGCATCAAGTCCAAGGCAAGACACAAGTGGTGCTCGTTAAACAAGACCTACGAAGGATACTGGAAGTTTTGCAGTGCAGAAGATTTTGCAAACTGTGTATTTCCCTTCTGGTACAGACGCTTGATCTACTGGGAGTGTACTGATGATGGGGAAGCATTTGGGAAAAAATGGTGTTCACTGACCAAGAATTTTAACAAGGACCGAATTTGGAAATACTGTGAATGA
Amino sequence
MGSLMLLFVETTRNSSACIFPVILNELSSTVETITHFPEVTDGECVFPFHYKNGTYYDCIKSKARHKWCSLNKTYEGYWKFCSAEDFANCVFPFWYRRLIYWECTDDGEAFGKKWCSLTKNFNKDRIWKYCE*