ENST00000342929.4 NLRP13

Information
Transcript ID
ENST00000342929.4
Genome
hg38
Position
chr19:55,895,945-55,932,336
Strand
-
CDS length
3,132
Amino acid length
1,044
Gene symbol
NLRP13
Gene type
protein-coding
Gene description
NLR family pyrin domain containing 13
Gene Entrez Gene ID
126204
Variants

Display target variant


Search Word
Target data :
MGeND data only
Category :
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Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
Search Word
Target data :
MGeND data only
Category :
Search word :
Filtering :
Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Search Word
Target data :
MGeND data only
Category :
Search word :
Filtering :
Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
11 55,895,945 55,896,119
10 55,898,770 55,898,937
9 55,902,035 55,902,205
8 55,904,942 55,905,112
7 55,907,792 55,907,956
6 55,910,563 55,910,733
5 55,911,706 55,913,293
4 55,923,914 55,923,979
3 55,924,590 55,924,658
2 55,924,967 55,925,035
1 55,931,993 55,932,336
CDS
Exon number Type Start Stop
11 CDS 55,895,945 55,896,119
10 CDS 55,898,770 55,898,937
9 CDS 55,902,035 55,902,205
8 CDS 55,904,942 55,905,112
7 CDS 55,907,792 55,907,956
6 CDS 55,910,563 55,910,733
5 CDS 55,911,706 55,913,293
4 CDS 55,923,914 55,923,979
3 CDS 55,924,590 55,924,658
2 CDS 55,924,967 55,925,035
1 CDS 55,931,993 55,932,311
Other genome
Genome Chromosome Start End Links
hg19 chr19 56,407,311 56,443,702 Link
CDS sequence
ATGAACTTTTCTGTAATCACCTGCCCCAACGGTGGTACCAACCAAGGGCTTCTGCCTTACCTGATGGCCCTGGATCAGTATCAGCTGGAGGAATTCAAGCTTTGCTTGGAACCCCAGCAGCTGATGGACTTCTGGTCGGCCCCCCAGGGGCACTTCCCGCGTATCCCCTGGGCAAACTTGAGAGCTGCCGACCCTTTGAATCTGTCCTTTCTTTTGGATGAACACTTCCCAAAAGGTCAGGCATGGAAAGTGGTCCTCGGCATCTTCCAGACAATGAATCTGACCTCACTGTGTGAGAAAGTTAGAGCCGAGATGAAAGAGAATGTGCAGACCCAAGAGCTGCAAGATCCAACCCAGGAAGATCTAGAGATGCTAGAAGCAGCAGCAGGGAATATGCAGACCCAGGGATGCCAAGATCCAAACCAAGAAGAACTAGACGAGCTAGAAGAAGAAACAGGGAATGTACAGGCCCAGGGATGCCAAGATCCAAACCAAGAAGAACCAGAGATGCTAGAGGAAGCAGACCACAGAAGAAAATACAGAGAGAACATGAAGGCTGAACTACTGGAGACATGGGACAACATCAGTTGGCCTAAAGACCACGTATATATCCGTAATACATCAAAGGACGAACATGAGGAACTGCAGCGCCTACTGGATCCTAATAGGACTAGAGCCCAGGCCCAGACGATAGTCTTGGTGGGGAGGGCAGGGGTTGGGAAGACCACCTTGGCAATGCAGGCTATGCTGCACTGGGCAAATGGAGTTCTCTTTCAGCAAAGGTTCTCCTATGTTTTCTATCTCAGCTGCCATAAAATAAGGTACATGAAGGAAACTACCTTTGCTGAATTGATTTCTTTGGATTGGCCCGATTTTGATGCCCCCATTGAAGAGTTCATGTCTCAACCAGAGAAGCTCCTGTTTATTATTGATGGCTTTGAGGAAATAATCATATCTGAGTCACGCTCTGAGAGCTTGGATGATGGCTCGCCATGTACAGACTGGTACCAGGAGCTCCCAGTGACCAAAATCCTACACAGCTTGTTGAAGAAAGAATTGGTTCCCCTGGCTACCTTACTGATCACGATCAAGACCTGGTTTGTGAGAGATCTTAAGGCCTCATTAGTGAATCCATGCTTTGTACAAATTACAGGGTTCACAGGGGACGACCTACGGGTATATTTCATGAGACACTTTGATGACTCAAGTGAAGTTGAGAAAATCCTGCAGCAGCTAAGAAAAAACGAAACTCTCTTTCATTCCTGCAGTGCCCCCATGGTGTGTTGGACCGTATGTTCCTGTCTGAAGCAGCCGAAGGTGAGGTATTACGATCTCCAGTCAATCACTCAGACTACCACCAGTCTGTATGCCTATTTTTTCTCCAACTTGTTCTCCACAGCAGAGGTAGATTTGGCAGATGACAGCTGGCCAGGACAATGGAGGGCCCTCTGCAGTCTGGCCATAGAAGGGCTGTGGTCTATGAACTTCACGTTTAACAAAGAAGACACTGAGATCGAGGGCCTGGAAGTGCCTTTCATTGATTCTCTCTACGAGTTCAATATTCTTCAAAAGATCAATGACTGTGGGGGTTGCACTACTTTCACCCACCTAAGTTTCCAGGAGTTTTTTGCAGCCATGTCCTTTGTGCTAGAGGAACCTAGAGAATTCCCTCCCCATTCCACAAAGCCACAAGAGATGAAGATGTTACTGCAACACGTCTTGCTTGACAAAGAAGCCTACTGGACTCCAGTGGTTCTGTTCTTCTTTGGTCTTTTAAATAAAAACATAGCAAGAGAACTGGAAGATACTTTGCATTGTAAAATATCTCCCAGGGTAATGGAGGAATTATTAAAGTGGGGAGAAGAGTTAGGTAAGGCTGAAAGTGCCTCTCTCCAATTTCACATTCTACGACTTTTTCACTGCCTACACGAGTCCCAGGAGGAAGACTTCACAAAGAAGATGTTGGGTCGTATCTTTGAAGTTGACCTTAATATTTTGGAGGACGAAGAACTCCAAGCTTCTTCATTTTGCCTAAAGCACTGTAAAAGGTTAAATAAGCTAAGGCTTTCTGTTAGCAGTCACATCCTTGAAAGGGACTTGGAAATTCTGGAGACAAGCAAGTTTGATTCCAGGATGCACGCATGGAACAGCATTTGCTCTACGTTGGTCACAAATGAGAATCTGCATGAGCTAGACCTGAGTAACAGCAAACTTCATGCTTCCTCTGTGAAGGGTCTCTGTCTTGCACTGAAAAATCCAAGATGCAAAGTCCAGAAACTGACGTGCAAATCGGTAACTCCTGAGTGGGTTCTGCAGGACCTCATTATTGCCCTTCAGGGTAACAGCAAGCTGACCCATCTGAACTTCAGCTCTAACAAGCTGGGAATGACTGTCCCCCTGATTCTTAAAGCTTTGAGACACTCAGCTTGCAACCTCAAGTATCTGTGCCTGGAGAAATGCAACTTGTCGGCAGCCAGCTGTCAGGACCTAGCCTTGTTTCTCACCAGCATCCAACACGTAACTCGATTGTGCCTGGGATTTAATCGGCTCCAAGATGATGGCATAAAGCTATTGTGTGCGGCCCTGACTCACCCCAAGTGTGCCTTAGAGAGACTGGAGCTCTGGTTTTGCCAGCTGGCAGCACCCGCTTGCAAGCACTTGTCAGATGCTCTCCTGCAGAACAGGAGCCTGACACACCTGAATCTGAGCAAGAACAGCCTGAGAGACGAGGGAGTCAAGTTCCTGTGTGAGGCCTTGGGTCGCCCAGATGGTAACCTGCAGAGCCTGAATTTGTCAGGTTGTTCTTTCACAAGAGAGGGCTGTGGAGAGCTGGCTAATGCCCTCAGCCATAATCATAATGTGAAAATCTTGGATTTGGGAGAAAATGATCTTCAGGATGATGGAGTGAAGCTACTGTGTGAGGCTCTGAAACCACATCGTGCATTGCACACACTTGGGTTGGCGAAATGCAATCTGACAACTGCTTGCTGCCAGCATCTCTTCTCTGTTCTCAGCAGCAGTAAGAGCCTGGTCAATCTGAACCTTCTAGGCAATGAATTGGATACTGATGGTGTCAAGATGCTATGTAAGGCTTTGAAAAAGTCGACATGCAGGCTGCAGAAACTCGGGTAA
Amino sequence
MNFSVITCPNGGTNQGLLPYLMALDQYQLEEFKLCLEPQQLMDFWSAPQGHFPRIPWANLRAADPLNLSFLLDEHFPKGQAWKVVLGIFQTMNLTSLCEKVRAEMKENVQTQELQDPTQEDLEMLEAAAGNMQTQGCQDPNQEELDELEEETGNVQAQGCQDPNQEEPEMLEEADHRRKYRENMKAELLETWDNISWPKDHVYIRNTSKDEHEELQRLLDPNRTRAQAQTIVLVGRAGVGKTTLAMQAMLHWANGVLFQQRFSYVFYLSCHKIRYMKETTFAELISLDWPDFDAPIEEFMSQPEKLLFIIDGFEEIIISESRSESLDDGSPCTDWYQELPVTKILHSLLKKELVPLATLLITIKTWFVRDLKASLVNPCFVQITGFTGDDLRVYFMRHFDDSSEVEKILQQLRKNETLFHSCSAPMVCWTVCSCLKQPKVRYYDLQSITQTTTSLYAYFFSNLFSTAEVDLADDSWPGQWRALCSLAIEGLWSMNFTFNKEDTEIEGLEVPFIDSLYEFNILQKINDCGGCTTFTHLSFQEFFAAMSFVLEEPREFPPHSTKPQEMKMLLQHVLLDKEAYWTPVVLFFFGLLNKNIARELEDTLHCKISPRVMEELLKWGEELGKAESASLQFHILRLFHCLHESQEEDFTKKMLGRIFEVDLNILEDEELQASSFCLKHCKRLNKLRLSVSSHILERDLEILETSKFDSRMHAWNSICSTLVTNENLHELDLSNSKLHASSVKGLCLALKNPRCKVQKLTCKSVTPEWVLQDLIIALQGNSKLTHLNFSSNKLGMTVPLILKALRHSACNLKYLCLEKCNLSAASCQDLALFLTSIQHVTRLCLGFNRLQDDGIKLLCAALTHPKCALERLELWFCQLAAPACKHLSDALLQNRSLTHLNLSKNSLRDEGVKFLCEALGRPDGNLQSLNLSGCSFTREGCGELANALSHNHNVKILDLGENDLQDDGVKLLCEALKPHRALHTLGLAKCNLTTACCQHLFSVLSSSKSLVNLNLLGNELDTDGVKMLCKALKKSTCRLQKLG*