ENST00000533791.5 SLFN13

Information
Transcript ID
ENST00000533791.5
Genome
hg38
Position
chr17:35,439,498-35,446,010
Strand
-
CDS length
2,694
Amino acid length
898
Gene symbol
SLFN13
Gene type
protein-coding
Gene description
schlafen family member 13
Gene Entrez Gene ID
146857
Variants

Display target variant


Search Word
Target data :
MGeND data only
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Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
Search Word
Target data :
MGeND data only
Category :
Search word :
Filtering :
Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Search Word
Target data :
MGeND data only
Category :
Search word :
Filtering :
Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
4 35,439,498 35,441,366
3 35,441,563 35,442,286
2 35,443,789 35,443,920
1 35,444,615 35,446,010
CDS
Exon number Type Start Stop
4 CDS 35,440,595 35,441,366
3 CDS 35,441,563 35,442,286
2 CDS 35,443,789 35,443,920
1 CDS 35,444,615 35,445,680
Other genome
Genome Chromosome Start End Links
hg19 chr17 33,766,517 33,773,029 Link
CDS sequence
ATGGAGGCAAATCACTGCTCCCTGGGTGTGTATCCATCTTACCCAGACCTGGTCATCGATGTCGGAGAAGTGACTCTGGGAGAAGAAAACAGAAAAAAGCTACAGAAAACTCAGAGAGACCAAGAGAGGGCGAGAGTTATACGGGCCGCGTGTGCTTTATTAAACTCAGGAGGAGGAGTGATTCAGATGGAAATGGCCAACAGGGATGAGCGTCCCACAGAGATGGGACTGGATTTAGAAGAATCCTTGAGAAAGCTTATTCAGTATCCATATTTGCAGGCTTTCTTTGAGACTAAGCAACACGGAAGGTGTTTTTATATTTTTGTTAAATCTTGGAGTGGTGATCCTTTCCTTAAAGATGGTTCTTTCAATTCCCGCATTTGCAGCCTTAGTTCTTCATTATACTGTAGATCTGGCACCTCTGTGCTTCACATGAATTCAAGACAGGCATTCGATTTCCTGAAGACCAAGGAAAGACAGTCCAAATATAATCTGATTAATGAAGGGTCTCCACCTAGTAAAATTATGAAAGCTGTATACCAGAACATATCTGAGTCAAATCCTGCATATGAAGTTTTCCAAACTGACACTATTGAATATGGTGAAATCCTATCTTTTCCTGAGTCTCCATCCATAGAGTTTAAACAGTTCTCTACAAAACATATCCAACAATATGTAGAAAATATAATTCCAGAGTACATCTCTGCATTTGCAAACACTGAGGGAGGCTATCTTTTTATTGGAGTGGATGATAAGAGTAGGAAAGTCCTGGGATGTGCCAAAGAACAGGTTGACCCTGACTCTTTGAAAAATGTAATTGCAAGAGCAATTTCTAAGTTGCCCATTGTTCATTTTTGCTCTTCAAAACCTCGGGTAGAGTACAGCACCAAAATCGTAGAAGTGTTTTGTGGGAAAGAGTTGTATGGCTATCTCTGTGTGATTAAAGTGAAGGCATTCTGTTGTGTGGTGTTCTCGGAAGCTCCCAAGTCATGGATGGTGAGGGAGAAGTACATCCGCCCCTTGACAACTGAGGAATGGGTAGAGAAAATGATGGACGCAGATCCAGAGTTTCCTCCAGACTTTGCTGAGGCCTTTGAGTCTCAGTTGAGTCTATCTGACAGTCCTTCACTTTGCAGACCAGTGTATTCTAAGAAAGGTCTGGAACACAAAGCTGATCTACAACAACATTTATTTCCAGTTCCACCAGGACATTTGGAATGTACTCCAGAGTCCCTCTGGAAGGAGCTGTCTTTACAGCATGAAGGACTAAAGGAGTTAATACACAAGCAAATGCGACCTTTCTCCCAGGGAATTGTGATCCTCTCTAGAAGCTGGGCTGTGGACCTGAACTTGCAGGAGAAGCCAGGAGTCATCTGTGATGCTCTGCTGATAGCACAGAACAGCACCCCCATTCTCTACACCATTCTCAGGGAGCAGGATGCAGAGGGCCAGGACTACTGCACTCGCACCGCCTTTACTTTGAAGCAGAAGCTAGTGAACATGGGGGGCTACACCGGGAAGGTGTGTGTCAGGGCCAAGGTCCTCTGCCTGAGTCCTGAGAGCAGCGCAGAGGCCTTGGAGGCTGCAGTGTCTCCGATGGATTACCCTGCGTCCTATAGCCTTGCAGGCACCCAGCACATGGAAGCCCTGCTGCAGTCCCTCGTGATTGTCTTACTCGGCTTCAGGTCTCTCTTGAGTGACCAGCTCGGCTGTGAGGTTTTAAATCTGCTCACAGCCCAGCAGTATGAGATATTCTCCAGAAGCCTCCGCAAGAACAGAGAGTTGTTTGTCCACGGCTTACCTGGCTCAGGGAAGACCATCATGGCCATGAAGATCATGGAGAAGATCAGGAATGTGTTTCACTGTGAGGCACACAGAATTCTCTACGTTTGTGAAAACCAGCCTCTGAGGAACTTTATCAGTGATAGAAATATCTGCCGAGCAGAGACCCGGGAAACTTTCCTAAGAGAAAAATTTGAACACATTCAACACATCGTCATTGACGAAGCTCAGAATTTCCGTACTGAAGATGGGGACTGGTATAGGAAGGCAAAAACCATCACTCAGAGAGAAAAGGATTGTCCAGGAGTTCTCTGGATCTTTCTGGACTACTTTCAGACCAGTCACTTGGGTCACAGTGGCCTTCCCCCTCTCTCAGCACAGTATCCAAGAGAAGAGCTCACCAGAGTAGTTCGCAATGCAGATGAAATAGCCGAGTACATACAACAAGAAATGCAACTAATTATAGAAAATCCTCCAATTAATATCCCCCATGGGTATCTGGCAATTCTCAGTGAAGCTAAATGGGTTCCAGGTGTTCCAGGCAACACAAAGATTATTAAAAACTTTACTTTGGAGCAAATAGTGACCTATGTGGCAGACACCTGCAGGTGCTTCTTTGAAAGGGGCTATTCTCCAAAGGATGTTGCTGTGCTTGTCAGCACCGTGACAGAAGTGGAGCAGTATCAGTCTAAGCTCTTGAAAGCAATGAGGAAGAAAATGGTGGTGCAGCTCAGTGATGCATGTGATATGTTGGGTGTGCACATTGTGTTGGACAGTGTCCGGCGATTCTCAGGCCTGGAAAGGAGCATAGTGTTTGGGATCCATCCAAGGACAGCTGACCCAGCTATCTTACCCAATATTCTGATCTGTCTGGCTTCCAGGGCAAAACAGCACCTATATATTTTTCTGTGA
Amino sequence
MEANHCSLGVYPSYPDLVIDVGEVTLGEENRKKLQKTQRDQERARVIRAACALLNSGGGVIQMEMANRDERPTEMGLDLEESLRKLIQYPYLQAFFETKQHGRCFYIFVKSWSGDPFLKDGSFNSRICSLSSSLYCRSGTSVLHMNSRQAFDFLKTKERQSKYNLINEGSPPSKIMKAVYQNISESNPAYEVFQTDTIEYGEILSFPESPSIEFKQFSTKHIQQYVENIIPEYISAFANTEGGYLFIGVDDKSRKVLGCAKEQVDPDSLKNVIARAISKLPIVHFCSSKPRVEYSTKIVEVFCGKELYGYLCVIKVKAFCCVVFSEAPKSWMVREKYIRPLTTEEWVEKMMDADPEFPPDFAEAFESQLSLSDSPSLCRPVYSKKGLEHKADLQQHLFPVPPGHLECTPESLWKELSLQHEGLKELIHKQMRPFSQGIVILSRSWAVDLNLQEKPGVICDALLIAQNSTPILYTILREQDAEGQDYCTRTAFTLKQKLVNMGGYTGKVCVRAKVLCLSPESSAEALEAAVSPMDYPASYSLAGTQHMEALLQSLVIVLLGFRSLLSDQLGCEVLNLLTAQQYEIFSRSLRKNRELFVHGLPGSGKTIMAMKIMEKIRNVFHCEAHRILYVCENQPLRNFISDRNICRAETRETFLREKFEHIQHIVIDEAQNFRTEDGDWYRKAKTITQREKDCPGVLWIFLDYFQTSHLGHSGLPPLSAQYPREELTRVVRNADEIAEYIQQEMQLIIENPPINIPHGYLAILSEAKWVPGVPGNTKIIKNFTLEQIVTYVADTCRCFFERGYSPKDVAVLVSTVTEVEQYQSKLLKAMRKKMVVQLSDACDMLGVHIVLDSVRRFSGLERSIVFGIHPRTADPAILPNILICLASRAKQHLYIFL*