ENST00000625106.4 NXF2
Information
- Transcript ID
- ENST00000625106.4
- Genome
- hg38
- Position
- chrX:102,247,167-102,326,722
- Strand
- +
- CDS length
- 1,881
- Amino acid length
- 627
- Gene symbol
- NXF2
- Gene type
- protein-coding
- Gene description
- nuclear RNA export factor 2
- Gene Entrez Gene ID
- 56001
Variants
Display target variant
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Variant name | Gene | AA change | CDS | Japanese frequency |
TogoVar | MGeND | Genome | ClinVar | CIViC evidence | DisGeNET entry | COSMIC occurrence |
Prediction | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | Entry | Origin | Annotation | |||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Size | Chromosome | Start | Stop | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | ||||||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Gene symbol | Chromosome | Genomic start | Genomic stop | Strand | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | |||||||||||||||
Exon
| Exon number | Start | Stop |
|---|---|---|
| 1 | 102,247,167 | 102,247,238 |
| 2 | 102,248,437 | 102,248,558 |
| 3 | 102,307,026 | 102,307,121 |
| 4 | 102,316,963 | 102,317,152 |
| 5 | 102,317,379 | 102,317,529 |
| 6 | 102,317,833 | 102,317,916 |
| 7 | 102,318,028 | 102,318,132 |
| 8 | 102,318,248 | 102,318,328 |
| 9 | 102,318,515 | 102,318,584 |
| 10 | 102,318,741 | 102,318,829 |
| 11 | 102,318,950 | 102,319,057 |
| 12 | 102,319,237 | 102,319,346 |
| 13 | 102,321,025 | 102,321,061 |
| 14 | 102,321,442 | 102,321,510 |
| 15 | 102,321,597 | 102,321,652 |
| 16 | 102,321,784 | 102,321,891 |
| 17 | 102,322,012 | 102,322,070 |
| 18 | 102,322,209 | 102,322,324 |
| 19 | 102,322,420 | 102,322,462 |
| 20 | 102,323,063 | 102,323,135 |
| 21 | 102,323,670 | 102,323,852 |
| 22 | 102,326,263 | 102,326,323 |
| 23 | 102,326,470 | 102,326,722 |
CDS
| Exon number | Type | Start | Stop |
|---|---|---|---|
| 3 | CDS | 102,307,079 | 102,307,121 |
| 4 | CDS | 102,316,963 | 102,317,152 |
| 5 | CDS | 102,317,379 | 102,317,529 |
| 6 | CDS | 102,317,833 | 102,317,916 |
| 7 | CDS | 102,318,028 | 102,318,132 |
| 8 | CDS | 102,318,248 | 102,318,328 |
| 9 | CDS | 102,318,515 | 102,318,584 |
| 10 | CDS | 102,318,741 | 102,318,829 |
| 11 | CDS | 102,318,950 | 102,319,057 |
| 12 | CDS | 102,319,237 | 102,319,346 |
| 13 | CDS | 102,321,025 | 102,321,061 |
| 14 | CDS | 102,321,442 | 102,321,510 |
| 15 | CDS | 102,321,597 | 102,321,652 |
| 16 | CDS | 102,321,784 | 102,321,891 |
| 17 | CDS | 102,322,012 | 102,322,070 |
| 18 | CDS | 102,322,209 | 102,322,324 |
| 19 | CDS | 102,322,420 | 102,322,462 |
| 20 | CDS | 102,323,063 | 102,323,135 |
| 21 | CDS | 102,323,670 | 102,323,852 |
| 22 | CDS | 102,326,263 | 102,326,323 |
| 23 | CDS | 102,326,470 | 102,326,514 |
Other genome
| Genome | Chromosome | Start | End | Links |
|---|---|---|---|---|
| hg19 | chrX | 101,502,161 | 101,581,636 | Link |
CDS sequence
ATGTGCTCTACTCTAAAGAAGTGTGGGACATACAGAACTGAAGTTGCAGAATGCCATGACCATGGTAGCACTTTTCAAGGAAGAAAGAAAGGTGGGAGTTCTTTCCGGGATAATTTTGACAAGAGGAGCTGTCATTATGAACATGGTGGGTATGAGCGCCCGCCTTCACACTGCCAGGAGAATGATGGAAGCGTGGAGATGAGGGATGTCCACAAGGACCAACAACTAAGACACACTCCTTATAGCATCCGATGCGAAAGAAGAATGAAATGGCATAGTGAAGACGAAATCCGTATTACCACGTGGAGAAATAGAAAACCTCCGGAGAGAAAAATGAGTCAGAACACACAGGATGGATACACAAGGAACTGGTTTAAGGTCACAATTCCTTACGGGATAAAGTATGACAAGGCATGGCTAATGAATTCAATCCAGAGCCATTGCAGTGACCGCTTCACTCCGGTTGATTTCCACTACGTCCGAAATCGGGCATGCTTCTTTGTCCAGGATGCTAGCGCTGCCTCCGCATTGAAGGATGTCAGTTATAAGATTTATGATGATGAGAACCAAAAGATATGTATATTTGTCAATCATTCTACTGCGCCCTACTCTGTGAAGAATAAGTTGAAGCCAGGCCAAATGGAGATGCTAAAGCTGACCATGAACAAACGGTACAATGTCTCCCAGCAAGCTCTTGATCTCCAGAATCTCCGCTTTGACCCAGACTTGATGGGCCGTGACATTGATATAATCCTGAATCGAAGAAACTGCATGGCTGCCACCCTGAAGATCATTGAAAGAAATTTCCCTGAGCTGTTGTCTTTGAACTTGTGCAACAACAAGCTGTACCAGCTGGATGGCCTTTCTGACATTACAGAGAAGGCTCCCAAAGTCAAGACCCTGAATCTCTCCAAAAATAAGCTGGAGTCGGCGTGGGAGTTGGGCAAGGTGAAAGGGCTGAAGCTCGAAGAGCTATGGCTAGAAGGGAACCCGTTGTGCAGCACCTTCTCGGACCAGTCCGCCTATGTAAGTGCCATCCGGGATTGTTTCCCCAAGTTGTTACGCCTGGACGGCCGAGAGTTATCCGCACCAGTGATTGTTGACATTGACAGCTCTGAGACAATGAAACCCTGCAAGGAAAACTTTACTGGATCTGAGACCCTAAAGCATTTAGTCCTGCAATTCCTGCAGCAGTATTACTCGATCTATGACTCTGGAGATCGACAGGGTCTCCTCGGTGCTTACCACGATGAGGCCTGCTTCTCCTTGGCTATTCCCTTCGACCCCAAGGACTCAGCCCCGAGCAGCTTGTGCAAGTACTTTGAGGATAGCAGGAATATGAAAACACTCAAGGACCCCTACCTGAAGGGGGAACTGCTGAGGCGCACAAAACGTGACATTGTGGACTCCCTCAGTGCGTTGCCCAAAACTCAGCATGACCTCAGCTCCATCCTGGTGGACGTGTGGTGCCAGACGGAAAGGATGCTCTGCTTTTCTGTCAATGGGGTTTTCAAGGAAGTGGAAGGACAGTCTCAGGGTTCTGTTCTCGCCTTCACCCGGACCTTCATTGCTACCCCTGGCAGCAGTTCCAGTCTGTGCATCGTGAATGACGAGCTGTTTGTGAGGGATGCCAGCCCCCAAGAGACTCAGAGTGCCTTCTCCATCCCAGTGTCCACACTCTCCTCCAGCTCTGAGCCCTCCCTCTCCCAGGAGCAGCAGGAAATGGTGCAGGCTTTCTCTGCCCAGTCTGGGATGAAACTGGAGTGGTCTCAGAAGTGCCTTCAGGACAATGAGTGGAACTACACTAGAGCTGGCCAGGCCTTCACTATGCTCCAGACCGAGGGCAAGATCCCCGCGGAGGCCTTCAAGCAAATCTCCTAA
Amino sequence
MCSTLKKCGTYRTEVAECHDHGSTFQGRKKGGSSFRDNFDKRSCHYEHGGYERPPSHCQENDGSVEMRDVHKDQQLRHTPYSIRCERRMKWHSEDEIRITTWRNRKPPERKMSQNTQDGYTRNWFKVTIPYGIKYDKAWLMNSIQSHCSDRFTPVDFHYVRNRACFFVQDASAASALKDVSYKIYDDENQKICIFVNHSTAPYSVKNKLKPGQMEMLKLTMNKRYNVSQQALDLQNLRFDPDLMGRDIDIILNRRNCMAATLKIIERNFPELLSLNLCNNKLYQLDGLSDITEKAPKVKTLNLSKNKLESAWELGKVKGLKLEELWLEGNPLCSTFSDQSAYVSAIRDCFPKLLRLDGRELSAPVIVDIDSSETMKPCKENFTGSETLKHLVLQFLQQYYSIYDSGDRQGLLGAYHDEACFSLAIPFDPKDSAPSSLCKYFEDSRNMKTLKDPYLKGELLRRTKRDIVDSLSALPKTQHDLSSILVDVWCQTERMLCFSVNGVFKEVEGQSQGSVLAFTRTFIATPGSSSSLCIVNDELFVRDASPQETQSAFSIPVSTLSSSSEPSLSQEQQEMVQAFSAQSGMKLEWSQKCLQDNEWNYTRAGQAFTMLQTEGKIPAEAFKQIS*