ENST00000547002.5 SLC48A1

Information
Transcript ID
ENST00000547002.5
Genome
hg38
Position
chr12:47,758,578-47,780,307
Strand
+
CDS length
270
Amino acid length
90
Gene symbol
SLC48A1
Gene type
protein-coding
Gene description
solute carrier family 48 member 1
Gene Entrez Gene ID
55652
Variants

Display target variant


Search Word
Target data :
MGeND data only
Category :
Search word :
Filtering :
Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
Search Word
Target data :
MGeND data only
Category :
Search word :
Filtering :
Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Search Word
Target data :
MGeND data only
Category :
Search word :
Filtering :
Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
1 47,758,578 47,758,660
2 47,760,216 47,760,401
3 47,772,170 47,772,320
4 47,779,028 47,779,195
5 47,780,145 47,780,307
CDS
Exon number Type Start Stop
4 CDS 47,779,063 47,779,195
5 CDS 47,780,145 47,780,281
Other genome
Genome Chromosome Start End Links
hg19 chr12 48,152,361 48,174,090 Link
CDS sequence
ATGTACATGCAAGATTATTGGAGGACCTGGCTCAAGGGGCTGCGCGGCTTCTTCTTCGTGGGCGTCCTCTTCTCGGCCGTCTCCATCGCTGCCTTCTGCACCTTCCTCGTGCTGGCCATCACCCGGCATCAGAGCCTCACAGACCCCACCAGCTACTACCTCTCCAGCGTCTGGAGCTTCATTTCCTTCAAGTGGGCCTTCCTGCTCAGCCTCTATGCCCACCGCTACCGGGCTGACTTTGCTGACATCAGCATCCTCAGCGATTTCTGA
Amino sequence
MYMQDYWRTWLKGLRGFFFVGVLFSAVSIAAFCTFLVLAITRHQSLTDPTSYYLSSVWSFISFKWAFLLSLYAHRYRADFADISILSDF*