ENST00000370848.8 SS18L1
Information
- Transcript ID
- ENST00000370848.8
- Genome
- hg38
- Position
- chr20:62,161,418-62,180,280
- Strand
- +
- CDS length
- 945
- Amino acid length
- 315
- Gene symbol
- SS18L1
- Gene type
- protein-coding
- Gene description
- SS18L1 subunit of BAF chromatin remodeling complex
- Gene Entrez Gene ID
- 26039
Variants
Display target variant
Search Word
| Target data | : |
MGeND data only
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| Category | : |
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| Search word | : | |
| Filtering | : |
| Variant name | Gene | AA change | CDS | Japanese frequency |
TogoVar | MGeND | Genome | ClinVar | CIViC evidence | DisGeNET entry | COSMIC occurrence |
Prediction | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | Entry | Origin | Annotation | |||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Size | Chromosome | Start | Stop | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | ||||||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Gene symbol | Chromosome | Genomic start | Genomic stop | Strand | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | |||||||||||||||
Exon
| Exon number | Start | Stop |
|---|---|---|
| 1 | 62,161,418 | 62,161,580 |
| 2 | 62,162,752 | 62,162,931 |
| 3 | 62,163,458 | 62,163,622 |
| 4 | 62,164,145 | 62,164,246 |
| 5 | 62,165,422 | 62,165,514 |
| 6 | 62,172,682 | 62,172,801 |
| 7 | 62,174,517 | 62,174,644 |
| 8 | 62,179,182 | 62,179,356 |
| 9 | 62,180,169 | 62,180,280 |
CDS
| Exon number | Type | Start | Stop |
|---|---|---|---|
| 1 | CDS | 62,161,451 | 62,161,580 |
| 2 | CDS | 62,162,752 | 62,162,931 |
| 3 | CDS | 62,163,458 | 62,163,622 |
| 4 | CDS | 62,164,145 | 62,164,246 |
| 5 | CDS | 62,165,422 | 62,165,514 |
| 6 | CDS | 62,172,682 | 62,172,801 |
| 7 | CDS | 62,174,517 | 62,174,644 |
| 8 | CDS | 62,179,182 | 62,179,208 |
Other genome
| Genome | Chromosome | Start | End | Links |
|---|---|---|---|---|
| hg19 | chr20 | 60,736,474 | 60,755,336 | Link |
CDS sequence
ATGAACCTGGGCCCTGGAGCCCTGACTCAGAGCGGCTCCAGCCAGGGCCTGCACTCTCAGGGCAGCCTGAGTGACGCCATCAGCACGGGCCTGCCACCCTCCTCCCTCCTGCAGGGCCAGATTGGCAACGGGCCGAGCCACGTGTCCATGCAGCAGACGGCGCCTAACACGCTGCCCACCACCTCCATGAGCATCTCTGGGCCCGGCTACAGCCACGCGGGACCCGCCTCGCAGGGCGTCCCCATGCAGGGGCAAGGCACCATCGGCAACTACGTGTCTCGGACCAACATCAACATGCAGTCCAACCCAGTCTCCATGATGCAGCAGCAGGCGGCCACGTCGCACTACAGCTCGGCGCAGGGCGGCAGCCAGCACTACCAGGGCCAGTCGTCCATCGCCATGATGGGGCAGGGCAGCCAGGGGAGCAGCATGATGGGGCAGCGGCCCATGGCGCCCTACCGGCCCTCCCAGCAAGGCTCTTCCCAGCAGTACCTGGGCCAGGAGGAGTACTATGGCGAGCAGTACAGCCACAGCCAGGGCGCCGCGGAGCCCATGGGCCAGCAGTACTACCCCGACGGCCATGGCGATTACGCCTACCAGCAGTCATCCTACACGGAGCAGAGCTACGACCGGTCCTTCGAGGAGTCCACGCAGCACTACTATGAGGGGGGAAACTCCCAGTACAGCCAGCAGCAGGCCGGGTACCAGCAGGGTGCCGCGCAGCAGCAGACGTACTCCCAGCAGCAGTACCCCAGCCAGCAGAGCTACCCCGGGCAGCAGCAGGGCTACGGGTCTGCCCAGGGAGCCCCGTCACAGTACCCCGGCTACCAGCAAGGCCAAGGCCAGCAGTACGGAAGCTACCGAGCACCGCAGACAGCGCCGTCTGCCCAGCAGCAGCGGCCCTACGGCTATGAACAGGGCCAGTATGGAAATTACCAGCAGTAA
Amino sequence
MNLGPGALTQSGSSQGLHSQGSLSDAISTGLPPSSLLQGQIGNGPSHVSMQQTAPNTLPTTSMSISGPGYSHAGPASQGVPMQGQGTIGNYVSRTNINMQSNPVSMMQQQAATSHYSSAQGGSQHYQGQSSIAMMGQGSQGSSMMGQRPMAPYRPSQQGSSQQYLGQEEYYGEQYSHSQGAAEPMGQQYYPDGHGDYAYQQSSYTEQSYDRSFEESTQHYYEGGNSQYSQQQAGYQQGAAQQQTYSQQQYPSQQSYPGQQQGYGSAQGAPSQYPGYQQGQGQQYGSYRAPQTAPSAQQQRPYGYEQGQYGNYQQ*