ENST00000368905.9 SCNM1

Information
Transcript ID
ENST00000368905.9
Genome
hg38
Position
chr1:151,166,144-151,170,296
Strand
+
CDS length
693
Amino acid length
231
Gene symbol
SCNM1
Gene type
protein-coding
Gene description
sodium channel modifier 1
Gene Entrez Gene ID
79005
Variants

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MGeND data only
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Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
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MGeND data only
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Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
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Target data :
MGeND data only
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Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
1 151,166,144 151,166,203
2 151,166,471 151,166,541
3 151,166,934 151,167,022
4 151,167,121 151,167,218
5 151,167,326 151,167,414
6 151,168,144 151,168,338
7 151,168,986 151,170,296
CDS
Exon number Type Start Stop
1 CDS 151,166,153 151,166,203
2 CDS 151,166,471 151,166,541
3 CDS 151,166,934 151,167,022
4 CDS 151,167,121 151,167,218
5 CDS 151,167,326 151,167,414
6 CDS 151,168,144 151,168,338
7 CDS 151,168,986 151,169,085
Other genome
Genome Chromosome Start End Links
hg19 chr1 151,138,620 151,142,772 Link
CDS sequence
ATGTCTTTCAAGAGGGAAGGAGACGATTGGAGTCAACTCAATGTGCTCAAAAAAAGAAGAGTCGGGGACCTCCTAGCCAGTTACATTCCAGAGGATGAGGCGCTGATGCTTCGGGATGGACGCTTTGCTTGTGCCATCTGCCCCCATCGACCGGTACTGGACACCCTGGCCATGCTGACTGCCCACCGTGCAGGCAAGAAACATCTGTCCAGCTTGCAGCTTTTCTATGGCAAGAAGCAGCCGGGAAAGGAAAGAAAGCAGAATCCAAAACATCAGAATGAATTGAGAAGGGAAGAAACCAAAGCTGAGGCTCCTCTGCTAACTCAGACACGACTTATCACCCAGAGTGCTCTGCACAGAGCTCCCCACTATAACAGTTGCTGCCGCCGGAAGTACAGACCAGAAGCCCCTGGTCCCTCTGTCTCCCTTTCCCCTATGCCACCCTCAGAGGTCAAACTCCAAAGTGGGAAGATCAGTAGGGAACCTGAACCTGCGGCTGGCCCACAGGCCGAGGAGTCAGCAACTGTCTCAGCCCCTGCACCCATGAGCCCCACAAGAAGACGAGCCCTGGACCATTATCTCACCCTTCGAAGCTCTGGATGGATCCCAGATGGACGAGGTCGATGGGTAAAAGATGAAAATGTTGAGTTTGACTCTGATGAGGAGGAACCACCTGATCTCCCCTTGGACTGA
Amino sequence
MSFKREGDDWSQLNVLKKRRVGDLLASYIPEDEALMLRDGRFACAICPHRPVLDTLAMLTAHRAGKKHLSSLQLFYGKKQPGKERKQNPKHQNELRREETKAEAPLLTQTRLITQSALHRAPHYNSCCRRKYRPEAPGPSVSLSPMPPSEVKLQSGKISREPEPAAGPQAEESATVSAPAPMSPTRRRALDHYLTLRSSGWIPDGRGRWVKDENVEFDSDEEEPPDLPLD*