ENST00000415314.7 GPATCH4
Information
- Transcript ID
- ENST00000415314.7
- Genome
- hg38
- Position
- chr1:156,594,987-156,601,490
- Strand
- -
- CDS length
- 1,252
- Amino acid length
- 417.333
- Gene symbol
- GPATCH4
- Gene type
- protein-coding
- Gene description
- G-patch domain containing 4 (gene/pseudogene)
- Gene Entrez Gene ID
- 54865
Variants
Display target variant
Search Word
Target data | : |
MGeND data only
|
Category | : |
|
Search word | : | |
Filtering | : |
Variant name | Gene | AA change | CDS | Japanese frequency |
TogoVar | MGeND | Genome | ClinVar | CIViC evidence | DisGeNET entry | COSMIC occurrence |
Prediction | |||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Entry | Origin | Type | Annotation | Entry | Origin | Annotation |
Search Word
Target data | : |
MGeND data only
|
Category | : |
|
Search word | : | |
Filtering | : |
Name | MGeND | Type | Genome | Size | Chromosome | Start | Stop | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Entry | Origin | Type | Annotation |
Search Word
Target data | : |
MGeND data only
|
Category | : |
|
Search word | : | |
Filtering | : |
Name | MGeND | Type | Genome | Gene symbol | Chromosome | Genomic start | Genomic stop | Strand | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Entry | Origin | Type | Annotation |
Exon
Exon number | Start | Stop |
---|---|---|
7 | 156,594,987 | 156,595,849 |
6 | 156,596,081 | 156,596,131 |
5 | 156,596,387 | 156,596,478 |
4 | 156,598,227 | 156,598,319 |
3 | 156,598,421 | 156,598,494 |
2 | 156,598,968 | 156,599,104 |
1 | 156,601,409 | 156,601,490 |
CDS
Exon number | Type | Start | Stop |
---|---|---|---|
7 | CDS | 156,594,987 | 156,595,849 |
6 | CDS | 156,596,081 | 156,596,131 |
5 | CDS | 156,596,387 | 156,596,478 |
4 | CDS | 156,598,227 | 156,598,319 |
3 | CDS | 156,598,421 | 156,598,494 |
2 | CDS | 156,598,968 | 156,599,046 |
Other genome
Genome | Chromosome | Start | End | Links |
---|---|---|---|---|
hg19 | chr1 | 156,564,779 | 156,571,282 | Link |
CDS sequence
ATGAATGTCACCCCAGAGGTCAAGAGTCGTGGGATGAAGTTTGCTGAGGAGCAGCTGCTAAAGCATGGATGGACTCAAGGCAAAGGCCTCGGCCGGAAGGAGAATGGTATCACTCAGGCTCTCAGGGTGACACTGAAGCAAGACACTCATGGGGTAGGACATGACCCTGCCAAGGAGTTCACAAACCACTGGTGGAATGAGCTCTTCAACAAGACTGCGGCCAACTTGGTAGTGGAAACTGGGCAGATGGCTACATTGACTTCAGGTGGAGAGAAGCCAAACAAAGACTTGGAGAGCTGCAGTGATGACGACAACCAGGGGTCCAAGTCCCCAAAGATTCTGACTGATGAGATGCTGCTCCAAGCCTGTGAGGGGCGAACAGCACACAAGGCTGCCCGTCTTGGGATCACAATGAAGGCCAAGCTTGCTCGCCTAGAGGCCCAGGAGCAGGCCTTCCTGGCTCGTCTCAAAGGCCAGGACCCTGGGGCCCCTCAACTGCAGTCAGAGAGCAAGCCCCCCAAAAAAAAGAAAAAGAAAAGGAGGCAGAAAGAGGAGGAAGAAGCTACAGCATCTGAAAGGAATGATGCAGATGAGAAGCACCCAGAACATGCTGAGCAGAACATCAGAAAAAGCAAGAAGAAGAAAAGGCGACATCAAGAAGGAAAGGTCTCAGATGAAAGAGAGGGTACAACTAAAGGGAATGAGAAGGAGGACGCTGCAGGAACAAGTGGGCTTGGGGAATTGAATAGCAGAGAGCAAACCAATCAGTCCCTCAGGAAAGGGAAGAAAAAGAAGAGGTGGCACCATGAAGAGGAGAAGATGGGGGTCTTGGAGGAAGGAGGAAAAGGCAAGGAGGCTGCAGGCAGTGTCAGGACAGAGGAGGTAGAGAGCAGGGCATATGCTGACCCATGCAGCCGAAGAAAGAAGAGGCAGCAACAGGAGGAGGAGGACTTGAACCTAGAAGATAGAGGTGAGGAAACTTTTAGGTGGTGGAACCAGGGAAGCAGAGAGCAGAGCATGCAGTGATGGAAGAAGCAGGAAAAGCAAGAAGAAAAGACAGCAGCATCAAGAGGAGGAGGACATCTTGGATGTAAGGGATGAGAAGGATGGCGGGGCTAGGGAAGCAGAGAGCAGAGCACACACTGGCTCAAGCAGCAGAGGTAAGAGGAAGAGGCAGCAGCATCCCAAGAAGGAAAGAGCTGGAGTCAGCACTGTCCAGAAAGCCAAAAAGAAACAGAAGAAGAGAGACTAA
Amino sequence
MNVTPEVKSRGMKFAEEQLLKHGWTQGKGLGRKENGITQALRVTLKQDTHGVGHDPAKEFTNHWWNELFNKTAANLVVETGQMATLTSGGEKPNKDLESCSDDDNQGSKSPKILTDEMLLQACEGRTAHKAARLGITMKAKLARLEAQEQAFLARLKGQDPGAPQLQSESKPPKKKKKKRRQKEEEEATASERNDADEKHPEHAEQNIRKSKKKKRRHQEGKVSDEREGTTKGNEKEDAAGTSGLGELNSREQTNQSLRKGKKKKRWHHEEEKMGVLEEGGKGKEAAGSVRTEEVESRAYADPCSRRKKRQQQEEEDLNLEDRGEETFRWWNQGSREQSMQ*WKKQEKQEEKTAASRGGGHLGCKG*EGWRG*GSREQSTHWLKQQR*EEEAAASQEGKSWSQHCPESQKETEEERL