ENST00000548753.1 COPZ1

Information
Transcript ID
ENST00000548753.1
Genome
hg38
Position
chr12:54,325,584-54,350,686
Strand
+
CDS length
270
Amino acid length
90
Gene symbol
COPZ1
Gene type
protein-coding
Gene description
COPI coat complex subunit zeta 1
Gene Entrez Gene ID
22818
Variants

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MGeND data only
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Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
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MGeND data only
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Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
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Target data :
MGeND data only
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Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
1 54,325,584 54,325,682
2 54,340,547 54,340,615
3 54,342,206 54,342,287
4 54,343,225 54,343,316
5 54,345,460 54,345,515
6 54,347,767 54,347,844
7 54,348,000 54,348,051
8 54,349,620 54,349,658
9 54,350,476 54,350,686
CDS
Exon number Type Start Stop
5 CDS 54,345,463 54,345,515
6 CDS 54,347,767 54,347,844
7 CDS 54,348,000 54,348,051
8 CDS 54,349,620 54,349,658
9 CDS 54,350,476 54,350,523
Other genome
Genome Chromosome Start End Links
hg19 chr12 54,719,368 54,744,470 Link
CDS sequence
ATGCTTATGGCTGTTCTGAACTGTCTCTTCGACTCATTGAGCCAGATGCTGAGGAAAAATGTAGAAAAGCGAGCACTGCTGGAGAACATGGAGGGGCTGTTCTTGGCTGTGGATGAAATTGTAGATGGAGGGGTGATCCTAGAGAGTGATCCCCAGCAGGTGGTACACCGGGTGGCATTAAGGGGTGAAGATGTCCCCCTTACGGAGCAGACCGTGTCTCAGGTGCTGCAGTCAGCCAAAGAACAGATCAAGTGGTCACTCCTTCGGTGA
Amino sequence
MLMAVLNCLFDSLSQMLRKNVEKRALLENMEGLFLAVDEIVDGGVILESDPQQVVHRVALRGEDVPLTEQTVSQVLQSAKEQIKWSLLR*