ENST00000578237.5 TRIM16

Information
Transcript ID
ENST00000578237.5
Genome
hg38
Position
chr17:15,627,960-15,684,300
Strand
-
CDS length
1,695
Amino acid length
565
Gene symbol
TRIM16
Gene type
protein-coding
Gene description
tripartite motif containing 16
Gene Entrez Gene ID
10626
Variants

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Target data :
MGeND data only
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Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
Search Word
Target data :
MGeND data only
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Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
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Target data :
MGeND data only
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Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
11 15,627,960 15,629,198
10 15,631,619 15,631,714
9 15,632,509 15,632,674
8 15,636,036 15,636,269
7 15,642,721 15,642,816
6 15,651,091 15,651,946
5 15,677,176 15,677,280
4 15,680,865 15,680,953
3 15,682,854 15,682,951
2 15,683,036 15,683,157
1 15,684,196 15,684,300
CDS
Exon number Type Start Stop
11 CDS 15,628,615 15,629,198
10 CDS 15,631,619 15,631,714
9 CDS 15,632,509 15,632,674
8 CDS 15,636,036 15,636,269
7 CDS 15,642,721 15,642,816
6 CDS 15,651,091 15,651,609
Other genome
Genome Chromosome Start End Links
hg19 chr17 15,531,274 15,587,614 Link
CDS sequence
ATGGCTGAGTTGGATCTAATGGCTCCAGGGCCACTGCCCAGGGCCACTGCTCAGCCCCCAGCCCCTCTCAGCCCAGACTCTGGGTCACCCAGCCCAGATTCTGGGTCAGCCAGCCCAGTGGAAGAAGAGGACGTGGGCTCCTCGGAGAAGCTTGGCAGGGAGACGGAGGAACAGGACAGCGACTCTGCAGAGCAGGGGGATCCTGCTGGTGAGGGGAAAGAGGTCCTGTGTGACTTCTGCCTTGATGACACCAGAAGAGTGAAGGCAGTGAAGTCCTGTCTAACCTGCATGGTGAATTACTGTGAAGAGCACTTGCAGCCGCATCAGGTGAACATCAAACTGCAAAGCCACCTGCTGACCGAGCCAGTGAAGGACCACAACTGGCGATACTGCCCTGCCCACCACAGCCCACTGTCTGCCTTCTGCTGCCCTGATCAGCAGTGCATCTGCCAGGACTGTTGCCAGGAGCACAGTGGCCACACCATAGTCTCCCTGGATGCAGCCCGCAGGGACAAGGAGGCTGAACTCCAGTGCACCCAGTTAGACTTGGAGCGGAAACTCAAGTTGAATGAAAATGCCATCTCCAGGCTCCAGGCTAACCAAAAGTCTGTTCTGGTGTCGGTGTCAGAGGTCAAAGCGGTGGCTGAAATGCAGTTTGGGGAACTCCTTGCTGCTGTGAGGAAGGCCCAGGCCAATGTGATGCTCTTCTTAGAGGAGAAGGAGCAAGCTGCGCTGAGCCAGGCCAACGGTATCAAGGCCCACCTGGAGTACAGGAGTGCCGAGATGGAGAAGAGCAAGCAGGAGCTGGAGAGGATGGCGGCCATCAGCAACACTGTCCAGTTCTTGGAGGAGTACTGCAAGTTTAAGAACACTGAAGACATCACCTTCCCTAGTGTTTACGTAGGGCTGAAGGATAAACTCTCGGGCATCCGCAAAGTTATCACGGAATCCACTGTACACTTAATCCAGTTGCTGGAGAACTATAAGAAAAAGCTCCAGGAGTTTTCCAAGGAAGAGGAGTATGACATCAGAACTCAAGTGTCTGCCGTTGTTCAGCGCAAATATTGGACTTCCAAACCTGAGCCCAGCACCAGGGAACAGTTCCTCCAATATGCGTATGACATCACGTTTGACCCGGACACAGCACACAAGTATCTCCGGCTGCAGGAGGAGAACCGCAAGGTCACCAACACCACGCCCTGGGAGCATCCCTACCCGGACCTCCCCAGCAGGTTCCTGCACTGGCGGCAGGTGCTGTCCCAGCAGAGTCTGTACCTGCACAGGTACTATTTTGAGGTGGAGATCTTCGGGGCAGGCACCTATGTTGGCCTGACCTGCAAAGGCATCGACCGGAAAGGGGAGGAGCGCAACAGTTGCATTTCCGGAAACAACTTCTCCTGGAGCCTCCAATGGAACGGGAAGGAGTTCACGGCCTGGTACAGTGACATGGAGACCCCACTCAAAGCTGGCCCTTTCCGGAGGCTCGGGGTCTATATCGACTTCCCGGGAGGGATCCTTTCCTTCTATGGCGTAGAGTATGATACCATGACTCTGGTTCACAAGTTTGCCTGCAAATTTTCAGAACCAGTCTATGCTGCCTTCTGGCTTTCCAAGAAGGAAAACGCCATCCGGATTGTAGATCTGGGAGAGGAACCCGAGAAGCCAGCACCGTCCTTGGTGGGGACTGCTCCCTAG
Amino sequence
MAELDLMAPGPLPRATAQPPAPLSPDSGSPSPDSGSASPVEEEDVGSSEKLGRETEEQDSDSAEQGDPAGEGKEVLCDFCLDDTRRVKAVKSCLTCMVNYCEEHLQPHQVNIKLQSHLLTEPVKDHNWRYCPAHHSPLSAFCCPDQQCICQDCCQEHSGHTIVSLDAARRDKEAELQCTQLDLERKLKLNENAISRLQANQKSVLVSVSEVKAVAEMQFGELLAAVRKAQANVMLFLEEKEQAALSQANGIKAHLEYRSAEMEKSKQELERMAAISNTVQFLEEYCKFKNTEDITFPSVYVGLKDKLSGIRKVITESTVHLIQLLENYKKKLQEFSKEEEYDIRTQVSAVVQRKYWTSKPEPSTREQFLQYAYDITFDPDTAHKYLRLQEENRKVTNTTPWEHPYPDLPSRFLHWRQVLSQQSLYLHRYYFEVEIFGAGTYVGLTCKGIDRKGEERNSCISGNNFSWSLQWNGKEFTAWYSDMETPLKAGPFRRLGVYIDFPGGILSFYGVEYDTMTLVHKFACKFSEPVYAAFWLSKKENAIRIVDLGEEPEKPAPSLVGTAP*