ENST00000339162.11 PDLIM2

Information
Transcript ID
ENST00000339162.11
Genome
hg38
Position
chr8:22,578,741-22,594,288
Strand
+
CDS length
1,809
Amino acid length
603
Gene symbol
PDLIM2
Gene type
protein-coding
Gene description
PDZ and LIM domain 2
Gene Entrez Gene ID
64236
Variants

Display target variant


Search Word
Target data :
MGeND data only
Category :
Search word :
Filtering :
Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
Search Word
Target data :
MGeND data only
Category :
Search word :
Filtering :
Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Search Word
Target data :
MGeND data only
Category :
Search word :
Filtering :
Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
1 22,578,741 22,579,527
2 22,580,603 22,580,697
3 22,581,379 22,581,530
4 22,584,821 22,584,890
5 22,585,017 22,585,162
6 22,585,321 22,585,399
7 22,589,298 22,589,374
8 22,589,596 22,589,741
9 22,591,551 22,591,668
10 22,593,733 22,594,288
CDS
Exon number Type Start Stop
1 CDS 22,578,780 22,579,527
2 CDS 22,580,603 22,580,697
3 CDS 22,581,379 22,581,530
4 CDS 22,584,821 22,584,890
5 CDS 22,585,017 22,585,162
6 CDS 22,585,321 22,585,399
7 CDS 22,589,298 22,589,374
8 CDS 22,589,596 22,589,741
9 CDS 22,591,551 22,591,668
10 CDS 22,593,733 22,593,910
Other genome
Genome Chromosome Start End Links
hg19 chr8 22,436,254 22,451,801 Link
CDS sequence
ATGCGGGGCGGGAGAGCGCGGCCGGCGTGGGAGAGCTTTATGGGGCTGCCCCCTCGATCGTCTGCGAAGTGGGGCGCGGGGCAGTCCCTGGACCGGCTCTGCTGTGCTCCGGGCAGTCGGGGGCTTGCGGGCGCTCCGGGGAGGATGCGGGCACCACCGGCTGGACGGTCGCAGCCTGCAGGGGGCCCTGGGGACAGCCTGCCTCATCCCCCCGGCGGGCTCGGGCCAGGTGGCAGCGCCTGGGCTCGCCGCGCGGAGGCGGCGGCTTCTCGGGCTAGGGGCGGCGGCAGGGGCGGCCCCGGGATCACATGGGCGGAGGCAGGTCCGGGAGCCCCGGGCGGGCTCTCCCCAGAGTCGGGTAGACGGCAGCGGGAGCGGTGGCGTCTCCCCGCCTTCCCTCCCTCCCGGGCCTGGGCGCCCAGCCGGACAGGTGAGCGGCAGCCAGGTGAGCGCGCCCACCTGCGCCTCTCCGCGCGGCCCGCCCTCCCCGGCGCCGGGCTCCTCTCCGCGCCCCTGTCGGCGCGGAACCCTGGCCTCGTCCGCGGCCCAGCTCCCTGGAGCCTCGCATCAGCGGGGGCGCCCCCGCGAGCTGCGCTCTCCCCGGCCGGAGCGCTCCTCCTCCAGCCCCCAGCCCGCAGGGTACTTTGCCCTCGGAGCGAAGGAGGCTCCAGAACTGGTAGAGCCGGGCCATCGGGCTGGGCACCTCCCCGCGGCGCCCGCAGCGCGGAGTCCACTGACCGGCTCAAAGGTATGGCGTTGACGGTGGATGTGGCCGGGCCAGCGCCCTGGGGCTTCCGTATCACAGGGGGCAGGGATTTCCACACGCCCATCATGGTGACTAAGGTGGCCGAGCGGGGCAAAGCCAAGGACGCTGACCTCCGGCCTGGAGACATAATCGTGGCCATCAACGGGGAAAGCGCGGAGGGCATGCTGCATGCCGAGGCCCAGAGCAAGATCCGCCAGAGCCCCTCGCCCCTGCGGCTGCAGCTGGACCGGTCTCAGGCTACGTCTCCAGGGCAGACCAATGGGGACAGCTCCTTGGAAGTGCTGGCGACTCGCTTCCAGGGCTCCGTGAGGACATACACTGAGAGTCAGTCCTCCTTAAGGTCCTCCTACTCCAGCCCAACCTCCCTCAGCCCGAGGGCCGGCAGCCCCTTCTCACCACCACCCTCTAGCAGCTCCCTCACTGGAGAGGCAGCCATCAGCCGCAGCTTCCAGAGTCTGGCATGTTCCCCGGGCCTCCCCGCTGCTGACCGCCTGTCCTACTCAGGCCGCCCTGGAAGCCGACAGGCCGGCCTCGGCCGCGCTGGCGACTCGGCGGTGCTGGTGCTGCCGCCTTCCCCGGGCCCTCGTTCCTCCAGGCCCAGCATGGACTCGGAAGGGGGAAGCCTCCTCCTGGACGAGGACTCGGAAGTCTTCAAGATGCTGCAGGAAAATCGCGAGGGACGGGCGGCCCCCCGACAGTCCAGCTCCTTTCGGCTCTTGCAGGAAGCCCTGGAGGCTGAGGAGAGAGGTGGCACGCCAGCCTTCTTGCCCAGCTCACTGAGCCCCCAGTCCTCCCTGCCCGCCTCCAGGGCCCTGGCCACCCCTCCCAAGCTCCACACTTGTGAGAAGTGCAGTACCAGCATCGCGAACCAGGCTGTGCGCATCCAGGAGGGCCGGTACCGCCACCCCGGCTGCTACACCTGTGCCGACTGTGGGCTGAACCTGAAGATGCGCGGGCACTTCTGGGTGGGTGACGAGCTGTACTGTGAGAAGCATGCCCGCCAGCGCTACTCCGCACCTGCCACCCTCAGCTCTCGGGCCTGA
Amino sequence
MRGGRARPAWESFMGLPPRSSAKWGAGQSLDRLCCAPGSRGLAGAPGRMRAPPAGRSQPAGGPGDSLPHPPGGLGPGGSAWARRAEAAASRARGGGRGGPGITWAEAGPGAPGGLSPESGRRQRERWRLPAFPPSRAWAPSRTGERQPGERAHLRLSARPALPGAGLLSAPLSARNPGLVRGPAPWSLASAGAPPRAALSPAGALLLQPPARRVLCPRSEGGSRTGRAGPSGWAPPRGARSAESTDRLKGMALTVDVAGPAPWGFRITGGRDFHTPIMVTKVAERGKAKDADLRPGDIIVAINGESAEGMLHAEAQSKIRQSPSPLRLQLDRSQATSPGQTNGDSSLEVLATRFQGSVRTYTESQSSLRSSYSSPTSLSPRAGSPFSPPPSSSSLTGEAAISRSFQSLACSPGLPAADRLSYSGRPGSRQAGLGRAGDSAVLVLPPSPGPRSSRPSMDSEGGSLLLDEDSEVFKMLQENREGRAAPRQSSSFRLLQEALEAEERGGTPAFLPSSLSPQSSLPASRALATPPKLHTCEKCSTSIANQAVRIQEGRYRHPGCYTCADCGLNLKMRGHFWVGDELYCEKHARQRYSAPATLSSRA*