ENST00000577399.5 FBXL20
Information
- Transcript ID
- ENST00000577399.5
- Genome
- hg38
- Position
- chr17:39,261,460-39,402,523
- Strand
- -
- CDS length
- 1,317
- Amino acid length
- 439
- Gene symbol
- FBXL20
- Gene type
- protein-coding
- Gene description
- F-box and leucine rich repeat protein 20
- Gene Entrez Gene ID
- 84961
Variants
Display target variant
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
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| Search word | : | |
| Filtering | : |
| Variant name | Gene | AA change | CDS | Japanese frequency |
TogoVar | MGeND | Genome | ClinVar | CIViC evidence | DisGeNET entry | COSMIC occurrence |
Prediction | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | Entry | Origin | Annotation | |||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Size | Chromosome | Start | Stop | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | ||||||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Gene symbol | Chromosome | Genomic start | Genomic stop | Strand | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | |||||||||||||||
Exon
| Exon number | Start | Stop |
|---|---|---|
| 15 | 39,261,460 | 39,261,567 |
| 14 | 39,264,175 | 39,264,387 |
| 13 | 39,265,397 | 39,265,453 |
| 12 | 39,268,827 | 39,268,871 |
| 11 | 39,270,796 | 39,270,856 |
| 10 | 39,274,970 | 39,275,100 |
| 9 | 39,281,389 | 39,281,463 |
| 8 | 39,282,729 | 39,282,855 |
| 7 | 39,285,478 | 39,285,573 |
| 6 | 39,297,127 | 39,297,195 |
| 5 | 39,298,990 | 39,299,084 |
| 4 | 39,301,001 | 39,301,075 |
| 3 | 39,303,585 | 39,303,639 |
| 2 | 39,343,180 | 39,343,241 |
| 1 | 39,402,173 | 39,402,523 |
CDS
| Exon number | Type | Start | Stop |
|---|---|---|---|
| 15 | CDS | 39,261,460 | 39,261,567 |
| 14 | CDS | 39,264,175 | 39,264,387 |
| 13 | CDS | 39,265,397 | 39,265,453 |
| 12 | CDS | 39,268,827 | 39,268,871 |
| 11 | CDS | 39,270,796 | 39,270,856 |
| 10 | CDS | 39,274,970 | 39,275,100 |
| 9 | CDS | 39,281,389 | 39,281,463 |
| 8 | CDS | 39,282,729 | 39,282,855 |
| 7 | CDS | 39,285,478 | 39,285,573 |
| 6 | CDS | 39,297,127 | 39,297,195 |
| 5 | CDS | 39,298,990 | 39,299,084 |
| 4 | CDS | 39,301,001 | 39,301,075 |
| 3 | CDS | 39,303,585 | 39,303,639 |
| 2 | CDS | 39,343,180 | 39,343,241 |
| 1 | CDS | 39,402,173 | 39,402,220 |
Other genome
| Genome | Chromosome | Start | End | Links |
|---|---|---|---|---|
| hg19 | chr17 | 37,417,713 | 37,558,776 | Link |
CDS sequence
ATGGCTCCGAGCAGGGACCGCCTGCTGCACTTTGGGTTCAAGGCGACAATGTTCTCAAATAGTGATGAAGCTGTAATCAATAAAAAACTTCCCAAAGAACTCCTGTTACGGATATTTTCTTTTCTAGATGTTGTTACCCTGTGCCGCTGTGCTCAGGTCTCCAGGGCCTGGAATGTTCTGGCTCTGGATGGCAGTAACTGGCAGCGAATTGACCTATTTGATTTCCAGAGGGATATTGAGGGCCGAGTAGTGGAGAATATTTCAAAACGATGTGGGGGCTTTTTACGAAAGTTAAGTCTTCGTGGATGTCTTGGAGTGGGAGACAATGCATTAAGAACCTTTGCACAAAACTGCAGGAACATTGAAGTACTGAATCTAAATGGGTGTACAAAGACAACAGACGCTACATGTACTAGCCTTAGCAAGTTCTGTTCCAAACTCAGGCACCTTGACTTGGCTTCCTGTACATCAATAACAAACATGTCTCTAAAAGCTCTGAGTGAGGGATGTCCACTGTTGGAGCAGTTGAACATTTCCTGGTGTGACCAAGTAACCAAGGATGGCATTCAAGCACTAGTGAGGGGCTGTGGGGGTCTCAAGGCCTTATTCTTAAAAGGCTGCACGCAGCTAGAAGATGAAGCTCTCAAGTACATAGGTGCACACTGCCCTGAACTGGTGACTTTGAACTTGCAGACTTGCTTGCAAATCACAGATGAAGGTCTCATTACTATATGCAGAGGGTGCCATAAGTTACAATCCCTTTGTGCCTCTGGCTGCTCCAACATCACAGATGCCATCCTGAATGCTCTAGGTCAGAACTGCCCACGGCTTAGAATATTGGAAGTGGCAAGATGTTCTCAATTAACAGATGTGGGCTTTACCACTCTAGCCAGGAATTGCCATGAACTTGAAAAGATGGACCTGGAAGAGTGTGTTCAGATAACAGATAGCACATTAATCCAACTTTCTATACACTGTCCTCGACTTCAAGTATTGAGTCTGTCTCACTGTGAGCTGATCACAGATGATGGAATTCGTCACCTGGGGAATGGGGCCTGCGCCCATGACCAGCTGGAGGTGATTGAGCTGGACAACTGCCCACTAATCACAGATGCATCCCTGGAGCACTTGAAGAGCTGTCATAGCCTTGAGCGGATAGAACTCTATGACTGCCAGCAAATCACACGGGCTGGAATCAAGAGACTCAGGACCCATTTACCCAATATTAAAGTCCACGCCTACTTCGCACCTGTCACTCCACCCCCATCAGTAGGGGGCAGCAGACAGCGCTTCTGCAGATGCTGCATCATCCTATGA
Amino sequence
MAPSRDRLLHFGFKATMFSNSDEAVINKKLPKELLLRIFSFLDVVTLCRCAQVSRAWNVLALDGSNWQRIDLFDFQRDIEGRVVENISKRCGGFLRKLSLRGCLGVGDNALRTFAQNCRNIEVLNLNGCTKTTDATCTSLSKFCSKLRHLDLASCTSITNMSLKALSEGCPLLEQLNISWCDQVTKDGIQALVRGCGGLKALFLKGCTQLEDEALKYIGAHCPELVTLNLQTCLQITDEGLITICRGCHKLQSLCASGCSNITDAILNALGQNCPRLRILEVARCSQLTDVGFTTLARNCHELEKMDLEECVQITDSTLIQLSIHCPRLQVLSLSHCELITDDGIRHLGNGACAHDQLEVIELDNCPLITDASLEHLKSCHSLERIELYDCQQITRAGIKRLRTHLPNIKVHAYFAPVTPPPSVGGSRQRFCRCCIIL*