ENST00000398873.4 YDJC
Information
- Transcript ID
- ENST00000398873.4
- Genome
- hg38
- Position
- chr22:21,628,167-21,630,035
- Strand
- -
- CDS length
- 450
- Amino acid length
- 150
- Gene symbol
- YDJC
- Gene type
- protein-coding
- Gene description
- YdjC chitooligosaccharide deacetylase homolog
- Gene Entrez Gene ID
- 150223
Variants
Display target variant
Search Word
| Target data | : |
MGeND data only
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| Category | : |
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| Variant name | Gene | AA change | CDS | Japanese frequency |
TogoVar | MGeND | Genome | ClinVar | CIViC evidence | DisGeNET entry | COSMIC occurrence |
Prediction | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | Entry | Origin | Annotation | |||||||||||
Search Word
| Target data | : |
MGeND data only
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| Category | : |
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| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Size | Chromosome | Start | Stop | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | ||||||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Gene symbol | Chromosome | Genomic start | Genomic stop | Strand | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | |||||||||||||||
Exon
| Exon number | Start | Stop |
|---|---|---|
| 4 | 21,628,167 | 21,628,787 |
| 3 | 21,629,308 | 21,629,407 |
| 2 | 21,629,602 | 21,629,761 |
| 1 | 21,629,851 | 21,630,035 |
CDS
| Exon number | Type | Start | Stop |
|---|---|---|---|
| 4 | CDS | 21,628,762 | 21,628,787 |
| 3 | CDS | 21,629,308 | 21,629,407 |
| 2 | CDS | 21,629,602 | 21,629,761 |
| 1 | CDS | 21,629,851 | 21,630,014 |
Other genome
| Genome | Chromosome | Start | End | Links |
|---|---|---|---|---|
| hg19 | chr22 | 21,982,456 | 21,984,324 | Link |
CDS sequence
ATGTCCCGCCCTCGCATGCGCCTGGTGGTCACCGCGGACGACTTTGGTTACTGCCCGCGACGCGATGAGGGTATCGTGGAGGCCTTTCTGGCCGGGGCTGTGACCAGCGTGTCCCTGCTGGTCAACGGTGCGGCCACGGAGAGCGCGGCGGAGCTGGCCCGCAGGCACAGCATCCCCACGGGCCTCCACGCCAACCTGTCCGAGGGCCGCCCCGTGGGTCCGGCCCGCCGTGGCGCCTCATCGCTGCTCGGCCCGGAAGGCTTCTTCCTTGGCAAGATGGGATTCCGGGAGGCGGTGGCGGCCGGAGACGTGGATTTGCCTCAGGTGCGGGAGGAGCTCGAGGCCCAACTAAGCTGCTTCCGGGAGCTGCTGGGCAGGGCCCCCACGCACGCGGACGGGCACCAGCACGTGCACGTGCTCCCAGGTGGACAGACGCCTTCGTGGGCCTGA
Amino sequence
MSRPRMRLVVTADDFGYCPRRDEGIVEAFLAGAVTSVSLLVNGAATESAAELARRHSIPTGLHANLSEGRPVGPARRGASSLLGPEGFFLGKMGFREAVAAGDVDLPQVREELEAQLSCFRELLGRAPTHADGHQHVHVLPGGQTPSWA*