ENST00000337502.6 SSX2

Information
Transcript ID
ENST00000337502.6
Genome
hg38
Position
chrX:52,696,896-52,707,178
Strand
-
CDS length
567
Amino acid length
189
Gene symbol
SSX2
Gene type
protein-coding
Gene description
SSX family member 2
Gene Entrez Gene ID
6757
Variants

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Target data :
MGeND data only
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Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
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Target data :
MGeND data only
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Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
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Target data :
MGeND data only
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Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
8 52,696,896 52,697,518
7 52,697,984 52,698,088
6 52,700,443 52,700,578
5 52,702,581 52,702,630
4 52,704,497 52,704,592
3 52,705,128 52,705,242
2 52,705,681 52,705,769
1 52,707,112 52,707,178
CDS
Exon number Type Start Stop
7 CDS 52,697,988 52,698,088
6 CDS 52,700,443 52,700,578
5 CDS 52,702,581 52,702,630
4 CDS 52,704,497 52,704,592
3 CDS 52,705,128 52,705,242
2 CDS 52,705,681 52,705,749
Other genome
Genome Chromosome Start End Links
hg19 chrX 52,725,946 52,736,228 Link
CDS sequence
ATGAACGGAGACGACGCCTTTGCAAGGAGACCCACGGTTGGTGCTCAAATACCAGAGAAGATCCAAAAGGCCTTCGATGATATTGCCAAATACTTCTCTAAGGAAGAGTGGGAAAAGATGAAAGCCTCGGAGAAAATCTTCTATGTGTATATGAAGAGAAAGTATGAGGCTATGACTAAACTAGGTTTCAAGGCCACCCTCCCACCTTTCATGTGTAATAAACGGGCCGAAGACTTCCAGGGGAATGATTTGGATAATGACCCTAACCGTGGGAATCAGGTTGAACGTCCTCAGATGACTTTCGGCAGGCTCCAGGGAATCTCCCCGAAGATCATGCCCAAGAAGCCAGCAGAGGAAGGAAATGATTCGGAGGAAGTGCCAGAAGCATCTGGCCCACAAAATGATGGGAAAGAGCTGTGCCCCCCGGGAAAACCAACTACCTCTGAGAAGATTCACGAGAGATCTGGACCCAAAAGGGGGGAACATGCCTGGACCCACAGACTGCGTGAGAGAAAACAGCTGGTGATTTATGAAGAGATCAGCGACCCTGAGGAAGATGACGAGTAA
Amino sequence
MNGDDAFARRPTVGAQIPEKIQKAFDDIAKYFSKEEWEKMKASEKIFYVYMKRKYEAMTKLGFKATLPPFMCNKRAEDFQGNDLDNDPNRGNQVERPQMTFGRLQGISPKIMPKKPAEEGNDSEEVPEASGPQNDGKELCPPGKPTTSEKIHERSGPKRGEHAWTHRLRERKQLVIYEEISDPEEDDE*