ENST00000525235.1 ARFIP2
Information
- Transcript ID
- ENST00000525235.1
- Genome
- hg38
- Position
- chr11:6,478,084-6,481,314
- Strand
- -
- CDS length
- 609
- Amino acid length
- 203
- Gene symbol
- ARFIP2
- Gene type
- protein-coding
- Gene description
- ADP ribosylation factor interacting protein 2
- Gene Entrez Gene ID
- 23647
Variants
Display target variant
Search Word
| Target data | : |
MGeND data only
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| Category | : |
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| Search word | : | |
| Filtering | : |
| Variant name | Gene | AA change | CDS | Japanese frequency |
TogoVar | MGeND | Genome | ClinVar | CIViC evidence | DisGeNET entry | COSMIC occurrence |
Prediction | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | Entry | Origin | Annotation | |||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
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| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Size | Chromosome | Start | Stop | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | ||||||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Gene symbol | Chromosome | Genomic start | Genomic stop | Strand | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | |||||||||||||||
Exon
| Exon number | Start | Stop |
|---|---|---|
| 7 | 6,478,084 | 6,478,198 |
| 6 | 6,478,579 | 6,478,652 |
| 5 | 6,478,738 | 6,478,959 |
| 4 | 6,479,140 | 6,479,258 |
| 3 | 6,479,972 | 6,480,068 |
| 2 | 6,480,323 | 6,480,463 |
| 1 | 6,481,231 | 6,481,314 |
CDS
| Exon number | Type | Start | Stop |
|---|---|---|---|
| 6 | CDS | 6,478,581 | 6,478,652 |
| 5 | CDS | 6,478,738 | 6,478,959 |
| 4 | CDS | 6,479,140 | 6,479,258 |
| 3 | CDS | 6,479,972 | 6,480,068 |
| 2 | CDS | 6,480,323 | 6,480,421 |
Other genome
| Genome | Chromosome | Start | End | Links |
|---|---|---|---|---|
| hg19 | chr11 | 6,499,314 | 6,502,544 | Link |
CDS sequence
ATGACGGACGGGATCCTAGGGAAGGCAGCCACAATGGAGATCCCTATCCACGGGAACGGCGAAGCCAGGCAGCTTCCTGAAGATGATGGGCTGGAGCAGGACCTCCAGCAGGTGATGGTGTCAGGACCCAACCTCAATGAAACCAGCATTGTGTCTGGTGGCTATGGGGGCTCTGGTGATGGACTCATCCCCACAGGGTCTGGCCGCCATCCATCTCACAGCACCACTCCTTCTGGCCCTGGAGATGAGGTGGCTCGGGGCATTGCTGGAGAAAAGTTTGACATCGTCAAGAAATGGGGCATCAACACCTATAAGTGCACAAAGCAACTGTTATCAGAACGATTTGGTCGAGGCTCACGGACTGTGGACCTGGAGCTAGAGCTGCAGATTGAGTTGCTGCGTGAGACGAAGCGCAAGTATGAGAGTGTCCTGCAGCTGGGCCGGGCACTGACAGCCCACCTCTACAGCCTGCTGCAGACCCAGCATGCACTGGGTGATGCCTTTGCTGACCTCAGCCAGAAGTCCCCAGAGCTTCAGCCCACAGGGAGAACCCCTTCAGGGTGGGCCCAGCCCTACCCCCAGCAGCACTCACCTGTGGAGGCAGCCTAA
Amino sequence
MTDGILGKAATMEIPIHGNGEARQLPEDDGLEQDLQQVMVSGPNLNETSIVSGGYGGSGDGLIPTGSGRHPSHSTTPSGPGDEVARGIAGEKFDIVKKWGINTYKCTKQLLSERFGRGSRTVDLELELQIELLRETKRKYESVLQLGRALTAHLYSLLQTQHALGDAFADLSQKSPELQPTGRTPSGWAQPYPQQHSPVEAA*