ENST00000445092.6 SLFN12

Information
Transcript ID
ENST00000445092.6
Genome
hg38
Position
chr17:35,409,720-35,433,145
Strand
-
CDS length
1,737
Amino acid length
579
Gene symbol
SLFN12
Gene type
protein-coding
Gene description
schlafen family member 12
Gene Entrez Gene ID
55106
Variants

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Target data :
MGeND data only
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Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
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Target data :
MGeND data only
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Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
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Target data :
MGeND data only
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Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
6 35,409,720 35,411,927
5 35,420,274 35,420,381
4 35,421,990 35,423,068
3 35,430,471 35,430,613
2 35,432,188 35,432,257
1 35,432,905 35,433,145
CDS
Exon number Type Start Stop
6 CDS 35,411,338 35,411,927
5 CDS 35,420,274 35,420,381
4 CDS 35,421,990 35,423,028
Other genome
Genome Chromosome Start End Links
hg19 chr17 33,736,739 33,760,164 Link
CDS sequence
ATGAACATCAGTGTTGATTTGGAAACGAATTATGCCGAGTTGGTTCTAGATGTGGGAAGAGTCACTCTTGGAGAGAACAGTAGGAAAAAAATGAAGGATTGTAAACTGAGAAAAAAGCAGAATGAAAGTGTCTCACGAGCTATGTGTGCTCTGCTCAATTCTGGAGGGGGAGTGATCAAGGCTGAAATTGAGAATGAAGACTATAGTTATACAAAAGATGGAATAGGACTAGATTTGGAAAATTCTTTTAGTAACATTCTGTTATTTGTTCCTGAGTACTTAGACTTCATGCAGAATGGTAACTACTTTCTGATTTTTGTGAAGTCATGGAGCTTGAACACCTCTGGTCTGCGGATTACCACCTTGAGCTCCAATTTGTACAAAAGAGATATAACATCTGCAAAAGTCATGAATGCCACTGCTGCACTGGAGTTCCTCAAAGACATGAAAAAGACTAGAGGGAGATTGTATTTAAGACCAGAATTGCTGGCAAAGAGGCCCTGTGTTGATATACAAGAAGAAAATAACATGAAGGCCTTGGCCGGGGTTTTTTTTGATAGAACAGAACTTGATCGGAAAGAAAAATTGACCTTTACTGAATCCACACATGTTGAAATTAAAAACTTCTCGACAGAAAAGTTGTTACAACGAATTAAAGAGATTCTCCCTCAATATGTTTCTGCATTTGCAAATACTGATGGAGGATATTTGTTCATTGGTTTAAATGAAGATAAAGAAATAATTGGCTTTAAAGCAGAGATGAGTGACCTCGATGACTTAGAAAGAGAAATCGAAAAGTCCATTAGGAAGATGCCTGTGCATCACTTCTGTATGGAGAAGAAGAAGATAAATTATTCATGCAAATTCCTTGGAGTATATGATAAAGGAAGTCTTTGTGGATATGTCTGTGCACTCAGAGTGGAGCGCTTCTGCTGTGCAGTGTTTGCTAAAGAGCCTGATTCCTGGCATGTGAAAGATAACCGTGTGATGCAGTTGACCAGGAAGGAATGGATCCAGTTCATGGTGGAGGCTGAACCAAAATTTTCCAGTTCATATGAAGAGGTGATCTCTCAAATAAATACGTCATTACCTGCTCCCCACAGTTGGCCTCTTTTGGAATGGCAACGGCAGAGACATCACTGTCCAGGGCTATCAGGAAGGATAACGTATACTCCAGAAAACCTTTGCAGAAAACTGTTCTTACAACATGAAGGACTTAAGCAATTAATATGTGAAGAAATGGACTCTGTCAGAAAGGGCTCACTGATCTTCTCTAGGAGCTGGTCTGTGGATCTGGGCTTGCAAGAGAACCACAAAGTCCTCTGTGATGCTCTTCTGATTTCCCAGGACAGTCCTCCAGTCCTATACACCTTCCACATGGTACAGGATGAGGAGTTTAAAGGCTATTCTACACAAACTGCCCTAACCTTAAAGCAGAAGCTGGCAAAAATTGGTGGTTACACTAAAAAAGTGTGTGTCATGACAAAGATCTTCTACTTGAGCCCTGAAGGCATGACAAGCTGCCAGTATGATTTAAGGTCGCAAGTAATTTACCCTGAATCCTACTATTTTACAAGAAGGAAATACTTGCTGAAAGCCCTTTTTAAAGCCTTAAAGAGACTCAAGTCTCTGAGAGACCAGTTTTCCTTTGCAGAAAATCTATACCAGATAATCGGTATAGATTGCTTTCAGAAGAATGATAAAAAGATGTTTAAATCTTGTCGAAGGCTCACCTGA
Amino sequence
MNISVDLETNYAELVLDVGRVTLGENSRKKMKDCKLRKKQNESVSRAMCALLNSGGGVIKAEIENEDYSYTKDGIGLDLENSFSNILLFVPEYLDFMQNGNYFLIFVKSWSLNTSGLRITTLSSNLYKRDITSAKVMNATAALEFLKDMKKTRGRLYLRPELLAKRPCVDIQEENNMKALAGVFFDRTELDRKEKLTFTESTHVEIKNFSTEKLLQRIKEILPQYVSAFANTDGGYLFIGLNEDKEIIGFKAEMSDLDDLEREIEKSIRKMPVHHFCMEKKKINYSCKFLGVYDKGSLCGYVCALRVERFCCAVFAKEPDSWHVKDNRVMQLTRKEWIQFMVEAEPKFSSSYEEVISQINTSLPAPHSWPLLEWQRQRHHCPGLSGRITYTPENLCRKLFLQHEGLKQLICEEMDSVRKGSLIFSRSWSVDLGLQENHKVLCDALLISQDSPPVLYTFHMVQDEEFKGYSTQTALTLKQKLAKIGGYTKKVCVMTKIFYLSPEGMTSCQYDLRSQVIYPESYYFTRRKYLLKALFKALKRLKSLRDQFSFAENLYQIIGIDCFQKNDKKMFKSCRRLT*