ENST00000340437.8 CPSF7

Information
Transcript ID
ENST00000340437.8
Genome
hg38
Position
chr11:61,402,641-61,429,911
Strand
-
CDS length
1,545
Amino acid length
515
Gene symbol
CPSF7
Gene type
protein-coding
Gene description
cleavage and polyadenylation specific factor 7
Gene Entrez Gene ID
79869
Variants

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Target data :
MGeND data only
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Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
Search Word
Target data :
MGeND data only
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Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Search Word
Target data :
MGeND data only
Category :
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Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
10 61,402,641 61,404,704
9 61,410,938 61,411,105
8 61,411,769 61,411,937
7 61,415,666 61,415,784
6 61,416,105 61,416,519
5 61,419,922 61,420,094
4 61,420,470 61,420,573
3 61,421,390 61,421,608
2 61,429,182 61,429,290
1 61,429,757 61,429,911
CDS
Exon number Type Start Stop
9 CDS 61,410,943 61,411,105
8 CDS 61,411,769 61,411,937
7 CDS 61,415,666 61,415,784
6 CDS 61,416,105 61,416,519
5 CDS 61,419,922 61,420,094
4 CDS 61,420,470 61,420,573
3 CDS 61,421,390 61,421,608
2 CDS 61,429,182 61,429,290
1 CDS 61,429,757 61,429,830
Other genome
Genome Chromosome Start End Links
hg19 chr11 61,170,113 61,197,383 Link
CDS sequence
ATGGGACGGCCGGAGTCTGCGGGCGGAGGGAGTCGCGGGCCTTTTGAGGGAGGAGGCAGAGCGCGCCGGGCCGGTGGCATCTTCCTTACTTTGTCCATCCTCCGGACTCGCGATCTTCCTTCCGGAGCCATGTCAGAAGGAGTGGACTTGATTGATATATATGCTGACGAGGAGTTCAACCAGGACCCAGAGTTCAACAATACAGATCAGATTGACCTGTATGATGATGTGCTGACAGCCACCTCACAGCCCTCAGATGACAGAAGCAGCAGCACTGAACCACCTCCTCCTGTTCGCCAGGAGCCATCTCCCAAGCCCAACAACAAGACCCCTGCAATTCTGTATACCTACAGTGGCCTGCGTAATAGACGAGCTGCCGTTTATGTGGGCAGCTTCTCCTGGTGGACCACAGACCAGCAGCTGATCCAGGTTATTCGCTCTATAGGAGTCTATGATGTGGTGGAGTTGAAATTTGCAGAGAATCGAGCAAATGGCCAGTCCAAAGGGTATGCTGAGGTGGTGGTAGCCTCTGAAAACTCTGTCCACAAATTGTTGGAACTCCTACCAGGGAAAGTTCTTAATGGAGAAAAAGTGGACGTGAGGCCGGCCACCCGGCAGAACCTGTCACAGTTTGAGGCACAGGCTCGGAAACGTGAGTGTGTCCGAGTCCCAAGAGGGGGAATACCTCCACGGGCCCATTCCCGAGATTCTAGTGATTCTGCTGATGGACGGGCCACACCCTCTGAGAACCTTGTACCCTCATCTGCTCGTGTGGATAAGCCCCCCAGTGTGCTGCCCTACTTCAATCGTCCTCCTTCGGCCCTTCCCCTGATGGGTCTGCCCCCACCACCAATTCCACCCCCACCACCTCTCTCCTCAAGCTTTGGGGTCCCTCCTCCTCCTCCTGGTATCCACTACCAGCATCTCATGCCCCCACCTCCTCGATTACCTCCTCATCTTGCTGTACCTCCCCCTGGGGCCATCCCACCTGCCCTTCACCTCAATCCAGCCTTCTTCCCCCCACCAAACGCTACAGTGGGGCCTCCACCAGATACTTACATGAAGGCCTCTGCCCCCTATAACCACCATGGCAGCCGAGATTCGGGCCCTCCACCCTCTACAGTGAGTGAAGCCGAATTTGAAGATATCATGAAGCGAAACAGAGCAATTTCCAGCAGTGCCATTTCCAAAGCAGTATCTGGAGCCAGTGCAGGGGATTACAGTGACGCAATTGAGACGCTGCTCACAGCCATTGCGGTTATCAAACAGTCCCGGGTTGCCAATGATGAGCGTTGCCGTGTCCTCATCTCCTCTCTTAAGGACTGTCTTCATGGCATCGAAGCCAAGTCCTACAGTGTGGGTGCCAGTGGGAGCTCTTCCAGGAAAAGACATCGCTCCCGGGAAAGGTCACCTAGCCGGTCCCGGGAGAGCAGCAGGAGGCACCGGGATCTGCTTCATAATGAAGATCGGCATGATGATTATTTCCAAGAAAGGAACCGGGAGCATGAGAGACACCGGGATAGAGAACGGGACCGGCACCACTGA
Amino sequence
MGRPESAGGGSRGPFEGGGRARRAGGIFLTLSILRTRDLPSGAMSEGVDLIDIYADEEFNQDPEFNNTDQIDLYDDVLTATSQPSDDRSSSTEPPPPVRQEPSPKPNNKTPAILYTYSGLRNRRAAVYVGSFSWWTTDQQLIQVIRSIGVYDVVELKFAENRANGQSKGYAEVVVASENSVHKLLELLPGKVLNGEKVDVRPATRQNLSQFEAQARKRECVRVPRGGIPPRAHSRDSSDSADGRATPSENLVPSSARVDKPPSVLPYFNRPPSALPLMGLPPPPIPPPPPLSSSFGVPPPPPGIHYQHLMPPPPRLPPHLAVPPPGAIPPALHLNPAFFPPPNATVGPPPDTYMKASAPYNHHGSRDSGPPPSTVSEAEFEDIMKRNRAISSSAISKAVSGASAGDYSDAIETLLTAIAVIKQSRVANDERCRVLISSLKDCLHGIEAKSYSVGASGSSSRKRHRSRERSPSRSRESSRRHRDLLHNEDRHDDYFQERNREHERHRDRERDRHH*