ENST00000581140.5 GDPD1

Information
Transcript ID
ENST00000581140.5
Genome
hg38
Position
chr17:59,220,522-59,275,505
Strand
+
CDS length
870
Amino acid length
290
Gene symbol
GDPD1
Gene type
protein-coding
Gene description
glycerophosphodiester phosphodiesterase domain containing 1
Gene Entrez Gene ID
284161
Variants

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Target data :
MGeND data only
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Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
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Target data :
MGeND data only
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Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
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Target data :
MGeND data only
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Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
1 59,220,522 59,220,751
2 59,234,492 59,234,534
3 59,245,414 59,245,549
4 59,248,740 59,248,785
5 59,257,122 59,257,240
6 59,257,751 59,257,840
7 59,267,041 59,267,174
8 59,270,936 59,270,995
9 59,272,785 59,272,805
10 59,275,120 59,275,505
CDS
Exon number Type Start Stop
1 CDS 59,220,610 59,220,751
2 CDS 59,234,492 59,234,534
3 CDS 59,245,414 59,245,549
4 CDS 59,248,740 59,248,785
5 CDS 59,257,122 59,257,240
6 CDS 59,257,751 59,257,840
7 CDS 59,267,041 59,267,174
8 CDS 59,270,936 59,270,995
9 CDS 59,272,785 59,272,805
10 CDS 59,275,120 59,275,198
Other genome
Genome Chromosome Start End Links
hg19 chr17 57,297,883 57,352,866 Link
CDS sequence
ATGTCGTCCACTGCGGCTTTTTACCTTCTCTCTACGCTAGGAGGATACTTGGTGACCTCATTCTTGTTGCTTAAATACCCGACCTTGCTGCACCAGAGAAAGAAGCAGCGATTCCTCAGTAAACACATCTCTCACCGCGGAGGTGCTGGAGAAAATTTGGAGAATACAATGGCAGCCTTTCAGCATGCGGTTAAAATCGGAACTGATATGCTAGAATTGGACTGCCATATCACAAAAGATGAACAAGTTGTAGTGTCACATGATGAGAATCTAAAGAGAGCAACTGGGGTCAATGTAAACATCTCTGATCTCAAATACTGTGAGCTCCCACCTTACCTTGGCAAACTGGATGTCTCATTTCAAAGAGCATGCCAGTGTGAAGGAAAAGATAACCGAATTCCATTACTGAAGGAAGTTTTTGAGGCCTTTCCTAACACTCCCATTAACATCGATATCAAAGTCAACAACAATGTGCTGATTAAGAAGGTTTCAGAGTTGGTGAAGCGGTATAATCGAGAACACTTAACAGTGTGGGGTAATGCCAATTATGAAATTGTAGAAAAGTGCTACAAAGAGAATTCAGATATTCCTATACTCTTCAGTCTACAACGTGTCCTGCTCATTCTTGGCCTTTTCTTCACTGGCCTCTTGCCCTTTGTGCCCATTCGAGAACAGTTTTTTGAAATCCCAATGCCTTCTATTATACTGAAGCTAAAAGAACCACACACCATGTCCAGAAGTCAAAAGTTTCTCATCTGGCTTTCTGATCTCTTACTAATGAGGAAAGCTTTGTTTGAACCACTGCACCCGGCCAGTAAAAGAAATTTTGAAGGCCATTGCAGCTATTTGGTAGTGTCTTGTTATTTCTAG
Amino sequence
MSSTAAFYLLSTLGGYLVTSFLLLKYPTLLHQRKKQRFLSKHISHRGGAGENLENTMAAFQHAVKIGTDMLELDCHITKDEQVVVSHDENLKRATGVNVNISDLKYCELPPYLGKLDVSFQRACQCEGKDNRIPLLKEVFEAFPNTPINIDIKVNNNVLIKKVSELVKRYNREHLTVWGNANYEIVEKCYKENSDIPILFSLQRVLLILGLFFTGLLPFVPIREQFFEIPMPSIILKLKEPHTMSRSQKFLIWLSDLLLMRKALFEPLHPASKRNFEGHCSYLVVSCYF*