ENST00000375661.6 LSM2

Information
Transcript ID
ENST00000375661.6
Genome
hg38
Position
chr6:31,797,396-31,806,966
Strand
-
CDS length
288
Amino acid length
96
Gene symbol
LSM2
Gene type
protein-coding
Gene description
LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated
Gene Entrez Gene ID
57819
Variants

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Target data :
MGeND data only
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Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
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Target data :
MGeND data only
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Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Search Word
Target data :
MGeND data only
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Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
5 31,797,396 31,797,882
4 31,797,990 31,798,049
3 31,798,477 31,798,507
2 31,806,075 31,806,142
1 31,806,755 31,806,966
CDS
Exon number Type Start Stop
5 CDS 31,797,757 31,797,882
4 CDS 31,797,990 31,798,049
3 CDS 31,798,477 31,798,507
2 CDS 31,806,075 31,806,142
1 CDS 31,806,755 31,806,757
Other genome
Genome Chromosome Start End Links
hg19 chr6 31,765,173 31,774,743 Link
CDS sequence
ATGCTCTTCTATTCTTTTTTCAAGTCCCTTGTGGGCAAGGATGTGGTCGTGGAACTAAAGAATGACCTGAGCATCTGTGGAACCCTCCATTCTGTGGATCAGTATCTCAACATCAAACTAACTGACATCAGTGTCACAGACCCTGAGAAATACCCTCACATGTTATCAGTGAAGAACTGCTTCATTCGGGGCTCAGTGGTCCGATACGTGCAGCTGCCAGCAGATGAGGTCGACACACAGTTGCTACAGGATGCGGCAAGGAAGGAAGCCCTGCAGCAGAAACAGTGA
Amino sequence
MLFYSFFKSLVGKDVVVELKNDLSICGTLHSVDQYLNIKLTDISVTDPEKYPHMLSVKNCFIRGSVVRYVQLPADEVDTQLLQDAARKEALQQKQ*