ENST00000540534.5 STMN3
Information
- Transcript ID
- ENST00000540534.5
- Genome
- hg38
- Position
- chr20:63,639,705-63,652,766
- Strand
- -
- CDS length
- 510
- Amino acid length
- 170
- Gene symbol
- STMN3
- Gene type
- protein-coding
- Gene description
- stathmin 3
- Gene Entrez Gene ID
- 50861
Variants
Display target variant
Search Word
| Target data | : |
MGeND data only
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| Category | : |
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| Search word | : | |
| Filtering | : |
| Variant name | Gene | AA change | CDS | Japanese frequency |
TogoVar | MGeND | Genome | ClinVar | CIViC evidence | DisGeNET entry | COSMIC occurrence |
Prediction | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | Entry | Origin | Annotation | |||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Size | Chromosome | Start | Stop | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | ||||||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Gene symbol | Chromosome | Genomic start | Genomic stop | Strand | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | |||||||||||||||
Exon
| Exon number | Start | Stop |
|---|---|---|
| 5 | 63,639,705 | 63,641,397 |
| 4 | 63,642,108 | 63,642,299 |
| 3 | 63,643,756 | 63,643,931 |
| 2 | 63,644,214 | 63,644,309 |
| 1 | 63,652,573 | 63,652,766 |
CDS
| Exon number | Type | Start | Stop |
|---|---|---|---|
| 5 | CDS | 63,641,338 | 63,641,397 |
| 4 | CDS | 63,642,108 | 63,642,299 |
| 3 | CDS | 63,643,756 | 63,643,931 |
| 2 | CDS | 63,644,214 | 63,644,295 |
Other genome
| Genome | Chromosome | Start | End | Links |
|---|---|---|---|---|
| hg19 | chr20 | 62,271,058 | 62,284,119 | Link |
CDS sequence
ATGAAGGAGCTGTCGGTGCTGTCGCTCATCTGCTCCTGCTTCTACACACAGCCGCACCCCAATACCGTCTACCAGTACGGGGACATGGAGGTGAAGCAGCTGGACAAGCGGGCCTCAGGCCAGAGCTTCGAGGTCATCCTCAAGTCCCCTTCTGACCTGTCCCCAGAGAGCCCTATGCTCTCCTCCCCACCCAAGAAGAAGGACACCTCCCTGGAGGAGCTGCAAAAGCGGCTGGAGGCAGCCGAGGAGCGGAGGAAGACGCAGGAGGCGCAGGTGCTGAAGCAGCTGGCGGAGCGGCGCGAGCACGAGCGCGAGGTGCTGCACAAGGCGCTGGAGGAGAATAACAACTTCAGCCGCCAGGCGGAGGAGAAGCTCAACTACAAGATGGAGCTCAGCAAGGAGATCCGCGAGGCACACCTGGCCGCACTGCGCGAGCGGCTGCGCGAGAAGGAGCTGCACGCGGCCGAGGTGCGCAGGAACAAGGAGCAGCGAGAAGAGATGTCGGGCTAA
Amino sequence
MKELSVLSLICSCFYTQPHPNTVYQYGDMEVKQLDKRASGQSFEVILKSPSDLSPESPMLSSPPKKKDTSLEELQKRLEAAEERRKTQEAQVLKQLAERREHEREVLHKALEENNNFSRQAEEKLNYKMELSKEIREAHLAALRERLREKELHAAEVRRNKEQREEMSG*