ENST00000525074.5 TRIM3
Information
- Transcript ID
- ENST00000525074.5
- Genome
- hg38
- Position
- chr11:6,448,614-6,474,459
- Strand
- -
- CDS length
- 2,235
- Amino acid length
- 745
- Gene symbol
- TRIM3
- Gene type
- protein-coding
- Gene description
- tripartite motif containing 3
- Gene Entrez Gene ID
- 10612
Variants
Display target variant
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Variant name | Gene | AA change | CDS | Japanese frequency |
TogoVar | MGeND | Genome | ClinVar | CIViC evidence | DisGeNET entry | COSMIC occurrence |
Prediction | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | Entry | Origin | Annotation | |||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Size | Chromosome | Start | Stop | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | ||||||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Gene symbol | Chromosome | Genomic start | Genomic stop | Strand | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | |||||||||||||||
Exon
| Exon number | Start | Stop |
|---|---|---|
| 12 | 6,448,614 | 6,449,180 |
| 11 | 6,449,306 | 6,449,446 |
| 10 | 6,450,551 | 6,450,621 |
| 9 | 6,450,892 | 6,451,060 |
| 8 | 6,451,271 | 6,451,438 |
| 7 | 6,456,072 | 6,456,175 |
| 6 | 6,456,297 | 6,457,029 |
| 5 | 6,457,296 | 6,457,476 |
| 4 | 6,457,696 | 6,457,847 |
| 3 | 6,458,065 | 6,458,296 |
| 2 | 6,465,565 | 6,465,732 |
| 1 | 6,474,102 | 6,474,459 |
CDS
| Exon number | Type | Start | Stop |
|---|---|---|---|
| 12 | CDS | 6,449,028 | 6,449,180 |
| 11 | CDS | 6,449,306 | 6,449,446 |
| 10 | CDS | 6,450,551 | 6,450,621 |
| 9 | CDS | 6,450,892 | 6,451,060 |
| 8 | CDS | 6,451,271 | 6,451,438 |
| 7 | CDS | 6,456,072 | 6,456,175 |
| 6 | CDS | 6,456,297 | 6,457,029 |
| 5 | CDS | 6,457,296 | 6,457,476 |
| 4 | CDS | 6,457,696 | 6,457,847 |
| 3 | CDS | 6,458,065 | 6,458,296 |
| 2 | CDS | 6,465,565 | 6,465,695 |
Other genome
| Genome | Chromosome | Start | End | Links |
|---|---|---|---|---|
| hg19 | chr11 | 6,469,844 | 6,495,689 | Link |
CDS sequence
ATGGCAAAGAGGGAGGACAGCCCTGGCCCAGAGGTCCAGCCAATGGACAAGCAGTTCCTGGTATGCAGCATCTGCCTGGATCGGTACCAGTGCCCCAAGGTTCTTCCTTGCCTGCACACCTTCTGTGAGAGATGTCTCCAAAACTATATCCCTGCCCAGAGCCTGACGCTATCCTGTCCAGTATGCCGGCAGACGTCCATCCTCCCAGAGCAGGGCGTCTCGGCACTGCAGAACAACTTCTTCATCAGCAGCCTCATGGAGGCAATGCAGCAGGCACCTGATGGGGCCCACGACCCGGAGGACCCCCACCCCCTCAGTGTAGTGGCTGGCCGCCCTCTCTCCTGCCCCAACCATGAAGGCAAGACGATGGAGTTTTACTGTGAGGCCTGTGAGACGGCCATGTGTGGTGAGTGCCGCGCCGGGGAGCATCGTGAGCATGGCACAGTGCTGCTGAGGGATGTGGTGGAGCAGCACAAGGCGGCCCTGCAGCGCCAGCTCGAGGCTGTGCGTGGCCGATTGCCACAGCTGTCCGCAGCAATTGCCTTAGTCGGGGGCATCAGCCAGCAGCTGCAGGAGCGCAAGGCAGAGGCCCTGGCCCAGATCAGTGCAGCGTTCGAGGACCTGGAGCAAGCACTGCAGCAGCGCAAGCAGGCTCTGGTCAGCGACCTGGAGACCATTTGTGGGGCCAAACAGAAGGTGTTGCAAAGCCAGCTGGACACACTGCGCCAGGGTCAGGAACACATCGGCAGTAGCTGCAGCTTTGCAGAGCAGGCACTGCGCCTGGGCTCGGCCCCGGAGGTGTTGCTGGTGCGCAAGCACATGCGAGAGCGGCTGGCTGCATTGGCGGCACAGGCCTTCCCGGAGCGGCCACATGAGAATGCACAGCTGGAACTGGTCCTTGAGGTGGACGGTCTGCGGCGATCGGTGCTCAATCTGGGCGCACTGCTCACCACGAGCGCCACTGCACACGAAACGGTGGCCACGGGAGAGGGCCTGCGCCAGGCGCTAGTGGGCCAGCCTGCCTCGCTCACTGTCACTACCAAAGACAAGGACGGGCGGTTGGTGCGCACAGGCAGCGCTGAGCTGCGTGCAGAGATCACCGGCCCGGACGGCACGCGCCTTCCGGTGCCAGTGGTGGACCACAAGAATGGCACATATGAGCTAGTGTACACAGCGCGCACGGAAGGCGAGCTGCTCCTCTCGGTGCTGCTCTACGGACAGCCAGTGCGCGGCAGCCCCTTCCGCGTGCGTGCCCTGCGTCCGGGGGACCTGCCACCTTCCCCGGACGATGTGAAGCGCCGTGTCAAGTCCCCTGGCGGCCCCGGCAGCCATGTGCGCCAGAAGGCAGTGCGTAGGCCCAGCTCCATGTACAGCACAGGCGGCAAACGAAAGGACAACCCAATTGAGGATGAGCTCGTCTTCCGTGTTGGCAGTCGTGGAAGGGAGAAAGGTGAATTCACCAATTTACAAGGTGTGTCCGCAGCCAGCAGCGGCCGCATCGTGGTAGCAGACAGCAACAACCAGTGTATTCAGGTTTTCTCCAATGAGGGCCAGTTCAAGTTCCGTTTTGGGGTCCGAGGACGCTCACCTGGGCAGCTGCAGCGCCCCACAGGTGTGGCAGTGGACACCAATGGAGACATAATTGTGGCAGACTATGACAACCGTTGGGTCAGCATCTTCTCCCCTGAGGGCAAGTTCAAGACCAAGATTGGAGCTGGCCGCCTCATGGGCCCCAAGGGAGTGGCCGTAGACCGGAATGGACATATCATTGTGGTCGACAACAAGTCTTGCTGCGTCTTTACCTTCCAGCCCAATGGCAAACTGGTTGGCCGTTTTGGGGGCCGTGGGGCCACTGACCGCCACTTTGCAGGGCCCCATTTTGTGGCTGTGAACAACAAGAATGAAATTGTAGTAACGGACTTCCATAACCATTCAGTGAAGGTGTACAGTGCCGATGGAGAGTTCCTCTTCAAGTTTGGCTCCCATGGCGAGGGCAATGGGCAGTTCAATGCCCCCACAGGAGTAGCTGTGGACTCCAATGGAAACATCATTGTGGCTGACTGGGGCAACAGCCGCATCCAGGTATTCGACAGCTCTGGCTCCTTCCTGTCCTATATCAACACATCTGCAGAACCACTGTATGGTCCACAGGGCCTGGCACTGACCTCGGATGGCCATGTGGTGGTGGCTGATGCTGGCAACCACTGCTTTAAAGCCTATCGCTACCTCCAGTAG
Amino sequence
MAKREDSPGPEVQPMDKQFLVCSICLDRYQCPKVLPCLHTFCERCLQNYIPAQSLTLSCPVCRQTSILPEQGVSALQNNFFISSLMEAMQQAPDGAHDPEDPHPLSVVAGRPLSCPNHEGKTMEFYCEACETAMCGECRAGEHREHGTVLLRDVVEQHKAALQRQLEAVRGRLPQLSAAIALVGGISQQLQERKAEALAQISAAFEDLEQALQQRKQALVSDLETICGAKQKVLQSQLDTLRQGQEHIGSSCSFAEQALRLGSAPEVLLVRKHMRERLAALAAQAFPERPHENAQLELVLEVDGLRRSVLNLGALLTTSATAHETVATGEGLRQALVGQPASLTVTTKDKDGRLVRTGSAELRAEITGPDGTRLPVPVVDHKNGTYELVYTARTEGELLLSVLLYGQPVRGSPFRVRALRPGDLPPSPDDVKRRVKSPGGPGSHVRQKAVRRPSSMYSTGGKRKDNPIEDELVFRVGSRGREKGEFTNLQGVSAASSGRIVVADSNNQCIQVFSNEGQFKFRFGVRGRSPGQLQRPTGVAVDTNGDIIVADYDNRWVSIFSPEGKFKTKIGAGRLMGPKGVAVDRNGHIIVVDNKSCCVFTFQPNGKLVGRFGGRGATDRHFAGPHFVAVNNKNEIVVTDFHNHSVKVYSADGEFLFKFGSHGEGNGQFNAPTGVAVDSNGNIIVADWGNSRIQVFDSSGSFLSYINTSAEPLYGPQGLALTSDGHVVVADAGNHCFKAYRYLQ*