ENST00000225519.5 SHPK

Information
Transcript ID
ENST00000225519.5
Genome
hg38
Position
chr17:3,608,240-3,636,250
Strand
-
CDS length
1,437
Amino acid length
479
Gene symbol
SHPK
Gene type
protein-coding
Gene description
sedoheptulokinase
Gene Entrez Gene ID
23729
Variants

Display target variant


Search Word
Target data :
MGeND data only
Category :
Search word :
Filtering :
Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
Search Word
Target data :
MGeND data only
Category :
Search word :
Filtering :
Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Search Word
Target data :
MGeND data only
Category :
Search word :
Filtering :
Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
7 3,608,240 3,610,972
6 3,615,337 3,615,537
5 3,621,237 3,621,412
4 3,623,339 3,623,491
3 3,624,048 3,624,231
2 3,630,205 3,630,346
1 3,636,052 3,636,250
CDS
Exon number Type Start Stop
7 CDS 3,610,560 3,610,972
6 CDS 3,615,337 3,615,537
5 CDS 3,621,237 3,621,412
4 CDS 3,623,339 3,623,491
3 CDS 3,624,048 3,624,231
2 CDS 3,630,205 3,630,346
1 CDS 3,636,052 3,636,219
Other genome
Genome Chromosome Start End Links
hg19 chr17 3,511,534 3,539,544 Link
CDS sequence
ATGGCTGCGCGGCCGATCACCCTCGGCATTGACCTGGGCACCACATCTGTGAAGGCAGCTCTGCTGAGGGCCGCGCCCGACGACCCATCCGGGTTCGCAGTGCTGGCGAGCTGTGCCCGTGCTGCGCGGGCAGAGGCGGCGGTCGAGAGCGCGGTGGCCGGGCCCCAGGGGCGGGAGCAGGATGTGAGTAGAATCCTCCAAGCCCTACACGAGTGCCTTGCTGCCCTTCCCCGACCCCAGCTCCGGAGCGTCGTGGGCATCGGGGTGTCGGGCCAGATGCATGGAGTCGTGTTTTGGAAAACAGGCCAAGGCTGTGAATGGACAGAGGGAGGGATTACCCCGGTGTTCGAGCCCCGAGCTGTTAGCCACCTGGTCACGTGGCAGGATGGCCGATGTAGCAGCGAATTCCTGGCCTCTCTGCCCCAGCCGAAGTCTCATCTCAGTGTGGCCACGGGCTTCGGCTGTGCAACCATCTTCTGGCTTTTGAAATATCGCCCAGAGTTCCTGAAGTCCTACGACGCAGCCGGTACCATCCACGACTATGTGGTTGCCATGCTGTGTGGCTTGCCAAGACCTCTGATGTCCGACCAGAATGCTGCCAGCTGGGGCTATTTCAACACGCAGAGCCAAAGCTGGAACGTAGAGACACTGAGGAGCTCGGGTTTTCCTGTCCACCTGCTCCCAGACATCGCCGAGCCTGGCAGTGTGGCGGGCAGAACTTCCCACATGTGGTTTGAAATCCCAAAGGGGACGCAGGTGGGAGTGGCCTTGGGTGATTTACAGGCCTCTGTCTATTCCTGCATGGCCCAGAGGACAGATGCAGTTCTCAACATCAGCACCTCGGTTCAGCTGGCAGCCTCCATGCCTTCAGGATTCCAGCCTGCACAGACTCCAGACCCTACGGCCCCAGTCGCCTACTTCCCATACTTCAACAGGACCTACCTGGGGGTGGCCGCGTCACTCAACGGGGGCAATGTGCTGGCCACGTTCGTCCACATGCTGGTTCAGTGGATGGCAGATCTAGGCCTGGAGGTTGAAGAATCCACTGTGTATTCACGCATGATTCAGGCAGCTGTGCAGCAGAGAGATACCCACCTGACCATCACCCCGACAGTGCTGGGGGAGAGGCACCTGCCGGACCAGCTGGCCTCAGTGACCAGAATCTCCTCCTCCGACCTCTCCCTGGGGCACGTGACCCGGGCTCTGTGCCGAGGCATTGTTCAGAACCTGCACTCCATGCTTCCGATTCAGCAGCTCCAGGAGTGGGGCGTGGAGAGGGTGATGGGCAGTGGGAGTGCGCTGTCCAGGAATGACGTGCTGAAGCAGGAGGTGCAGAGGGCTTTCCCTTTGCCCATGTCCTTTGGGCAGGATGTGGATGCAGCTGTCGGGGCAGCTCTGGTCATGCTCCGGAGACACCTCAACCAGAAGGAATCTTAG
Amino sequence
MAARPITLGIDLGTTSVKAALLRAAPDDPSGFAVLASCARAARAEAAVESAVAGPQGREQDVSRILQALHECLAALPRPQLRSVVGIGVSGQMHGVVFWKTGQGCEWTEGGITPVFEPRAVSHLVTWQDGRCSSEFLASLPQPKSHLSVATGFGCATIFWLLKYRPEFLKSYDAAGTIHDYVVAMLCGLPRPLMSDQNAASWGYFNTQSQSWNVETLRSSGFPVHLLPDIAEPGSVAGRTSHMWFEIPKGTQVGVALGDLQASVYSCMAQRTDAVLNISTSVQLAASMPSGFQPAQTPDPTAPVAYFPYFNRTYLGVAASLNGGNVLATFVHMLVQWMADLGLEVEESTVYSRMIQAAVQQRDTHLTITPTVLGERHLPDQLASVTRISSSDLSLGHVTRALCRGIVQNLHSMLPIQQLQEWGVERVMGSGSALSRNDVLKQEVQRAFPLPMSFGQDVDAAVGAALVMLRRHLNQKES*