ENST00000581870.1 CASKIN2
Information
- Transcript ID
- ENST00000581870.1
- Genome
- hg38
- Position
- chr17:75,505,319-75,515,440
- Strand
- -
- CDS length
- 972
- Amino acid length
- 324
- Gene symbol
- CASKIN2
- Gene type
- protein-coding
- Gene description
- CASK interacting protein 2
- Gene Entrez Gene ID
- 57513
Variants
Display target variant
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
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| Search word | : | |
| Filtering | : |
| Variant name | Gene | AA change | CDS | Japanese frequency |
TogoVar | MGeND | Genome | ClinVar | CIViC evidence | DisGeNET entry | COSMIC occurrence |
Prediction | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | Entry | Origin | Annotation | |||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Size | Chromosome | Start | Stop | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | ||||||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Gene symbol | Chromosome | Genomic start | Genomic stop | Strand | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | |||||||||||||||
Exon
| Exon number | Start | Stop |
|---|---|---|
| 10 | 75,505,319 | 75,505,651 |
| 9 | 75,505,821 | 75,505,929 |
| 8 | 75,506,305 | 75,506,413 |
| 7 | 75,506,583 | 75,506,713 |
| 6 | 75,506,799 | 75,506,894 |
| 5 | 75,506,984 | 75,507,129 |
| 4 | 75,507,584 | 75,507,681 |
| 3 | 75,508,234 | 75,508,285 |
| 2 | 75,513,711 | 75,514,208 |
| 1 | 75,515,401 | 75,515,440 |
CDS
| Exon number | Type | Start | Stop |
|---|---|---|---|
| 10 | CDS | 75,505,515 | 75,505,651 |
| 9 | CDS | 75,505,821 | 75,505,929 |
| 8 | CDS | 75,506,305 | 75,506,413 |
| 7 | CDS | 75,506,583 | 75,506,713 |
| 6 | CDS | 75,506,799 | 75,506,894 |
| 5 | CDS | 75,506,984 | 75,507,129 |
| 4 | CDS | 75,507,584 | 75,507,681 |
| 3 | CDS | 75,508,234 | 75,508,285 |
| 2 | CDS | 75,513,711 | 75,513,804 |
Other genome
| Genome | Chromosome | Start | End | Links |
|---|---|---|---|---|
| hg19 | chr17 | 73,501,400 | 73,511,521 | Link |
CDS sequence
ATGGGTCGTGAACAGGACCTGATCCTCGCCGTCAAGAATGGAGATGTGACCGGTGTGCAGAAACTGGTGGCGAAGGTCAAGGCCACAAAGACAAAGCTCCTGGGCTCCACAAAGAGGCTCAACGTGAACTACCAGGATGCTGATGGATTCTCTGCCCTCCACCACGCTGCTTTGGGGGGCAGCCTGGAGCTCATAGCCTTGCTGCTAGAGGCTCAGGCCACTGTTGACATCAAGGACAGCAATGGCATGCGCCCGCTGCACTACGCAGCCTGGCAGGGCCGGCTGGAGCCTGTGAGGCTGCTGCTGCGCGCCTCTGCGGCTGTCAATGCCGCCTCGCTGGACGGACAGATCCCCCTGCACCTGGCTGCACAGTATGGACATTATGAGGTGTCAGAAATGCTCCTCCAGCATCAGTCCAACCCATGCCTGGTCAACAAGGCCAAGAAGACGCCCCTGGACCTGGCCTGTGAATTTGGCCGACTCAAGGTGGCCCAGCTGCTTCTGAACAGCCACTTATGTGTGGCACTGCTGGAGGGTGAGGCCAAAGACCCGTGTGACCCCAACTACACCACGCCCCTGCACTTGGCTGCCAAGAATGGCCACAGAGAAGTCATCAGGCAGCTCCTGAGAGCTGGGATCGAGATCAACCGCCAGACCAAGACGGGTACGGCGCTCCACGAGGCCGCACTGTATGGCAAGACCGAGGTGGTGCGGCTGCTTCTGGAGGGAGGTGTGGACGTGAACATCCGGAATACGTATAACCAGACGGCGCTGGACATAGTGAATCAGTTCACCACCTCCCAGGCCAGCCGGGAAATCAAGCAGCTACTGCGGGAGGCCTCAGGGATCCTGAAGGTCCGAGCGCTCAAGGATTTCTGGAACCTCCACGATCCCACTGCTCTCAATGTCCGGGCAGGGGATGTCATCACGGTGAGGGACCCCAAGCAGGCATTCCTTTGCAAATACAAATGA
Amino sequence
MGREQDLILAVKNGDVTGVQKLVAKVKATKTKLLGSTKRLNVNYQDADGFSALHHAALGGSLELIALLLEAQATVDIKDSNGMRPLHYAAWQGRLEPVRLLLRASAAVNAASLDGQIPLHLAAQYGHYEVSEMLLQHQSNPCLVNKAKKTPLDLACEFGRLKVAQLLLNSHLCVALLEGEAKDPCDPNYTTPLHLAAKNGHREVIRQLLRAGIEINRQTKTGTALHEAALYGKTEVVRLLLEGGVDVNIRNTYNQTALDIVNQFTTSQASREIKQLLREASGILKVRALKDFWNLHDPTALNVRAGDVITVRDPKQAFLCKYK*