ENST00000320241.5 FOXL1
Information
- Transcript ID
- ENST00000320241.5
- Genome
- hg38
- Position
- chr16:86,578,549-86,583,478
- Strand
- +
- CDS length
- 1,038
- Amino acid length
- 346
- Gene symbol
- FOXL1
- Gene type
- protein-coding
- Gene description
- forkhead box L1
- Gene Entrez Gene ID
- 2300
Variants
Display target variant
Search Word
| Target data | : |
MGeND data only
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| Category | : |
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| Search word | : | |
| Filtering | : |
| Variant name | Gene | AA change | CDS | Japanese frequency |
TogoVar | MGeND | Genome | ClinVar | CIViC evidence | DisGeNET entry | COSMIC occurrence |
Prediction | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | Entry | Origin | Annotation | |||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Size | Chromosome | Start | Stop | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | ||||||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Gene symbol | Chromosome | Genomic start | Genomic stop | Strand | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | |||||||||||||||
Exon
| Exon number | Start | Stop |
|---|---|---|
| 1 | 86,578,549 | 86,583,478 |
CDS
| Exon number | Type | Start | Stop |
|---|---|---|---|
| 1 | CDS | 86,578,724 | 86,579,761 |
Other genome
| Genome | Chromosome | Start | End | Links |
|---|---|---|---|---|
| hg19 | chr16 | 86,612,155 | 86,617,084 | Link |
CDS sequence
ATGAGTCACCTCTTCGATCCCCGGCTGCCTGCCCTGGCCGCCTCGCCCATGCTGTATCTGTACGGTCCCGAGAGACCCGGCCTCCCTCTGGCCTTCGCCCCCGCGGCTGCTCTAGCTGCCTCGGGCCGGGCCGAGACCCCGCAGAAGCCTCCCTACAGCTACATCGCGCTCATCGCCATGGCGATCCAGGACGCGCCCGAGCAGAGGGTCACGCTCAACGGCATCTACCAGTTCATCATGGACCGCTTCCCCTTCTACCACGACAACCGGCAGGGCTGGCAGAACAGCATCCGCCACAACCTCTCGCTCAACGACTGCTTCGTCAAGGTGCCCCGCGAGAAAGGGCGGCCGGGCAAGGGCAGCTACTGGACGCTGGACCCCCGCTGCCTGGACATGTTTGAGAACGGCAACTACCGGCGCCGGAAGAGGAAGCCCAAGCCGGGCCCCGGGGCCCCGGAGGCCAAGAGGCCCCGCGCCGAGACGCACCAGCGCAGCGCGGAGGCGCAGCCGGAGGCGGGGAGCGGGGCAGGGGGCTCGGGCCCCGCAATCTCCCGCCTGCAGGCAGCGCCCGCGGGCCCCTCGCCCCTCCTGGACGGCCCCTCTCCGCCGGCGCCCCTCCACTGGCCGGGGACCGCGTCCCCGAACGAGGACGCTGGTGACGCTGCCCAGGGCGCAGCGGCCGTGGCGGTCGGCCAGGCAGCGCGCACAGGGGACGGCCCGGGGTCCCCTCTGCGCCCCGCCTCCCGCAGCTCTCCGAAGAGCTCCGACAAGTCCAAGAGCTTCAGCATAGACAGCATCCTGGCGGGAAAGCAGGGCCAGAAGCCGCCTTCAGGGGACGAACTCCTAGGGGGTGCCAAGCCTGGGCCCGGCGGCCGTCTGGGTGCCTCGCTCCTGGCCGCCTCCTCCAGCCTCCGTCCGCCTTTCAACGCTTCCCTGATGCTCGACCCGCATGTCCAGGGCGGCTTTTACCAGCTCGGGATCCCCTTCCTCTCTTATTTCCCCCTGCAGGTTCCCGACACGGTACTCCACTTCCAGTAA
Amino sequence
MSHLFDPRLPALAASPMLYLYGPERPGLPLAFAPAAALAASGRAETPQKPPYSYIALIAMAIQDAPEQRVTLNGIYQFIMDRFPFYHDNRQGWQNSIRHNLSLNDCFVKVPREKGRPGKGSYWTLDPRCLDMFENGNYRRRKRKPKPGPGAPEAKRPRAETHQRSAEAQPEAGSGAGGSGPAISRLQAAPAGPSPLLDGPSPPAPLHWPGTASPNEDAGDAAQGAAAVAVGQAARTGDGPGSPLRPASRSSPKSSDKSKSFSIDSILAGKQGQKPPSGDELLGGAKPGPGGRLGASLLAASSSLRPPFNASLMLDPHVQGGFYQLGIPFLSYFPLQVPDTVLHFQ*