ENST00000397168.7 SPATA22
Information
- Transcript ID
- ENST00000397168.7
- Genome
- hg38
- Position
- chr17:3,440,019-3,471,746
- Strand
- -
- CDS length
- 1,092
- Amino acid length
- 364
- Gene symbol
- SPATA22
- Gene type
- protein-coding
- Gene description
- spermatogenesis associated 22
- Gene Entrez Gene ID
- 84690
Variants
Display target variant
Search Word
| Target data | : |
MGeND data only
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| Category | : |
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| Search word | : | |
| Filtering | : |
| Variant name | Gene | AA change | CDS | Japanese frequency |
TogoVar | MGeND | Genome | ClinVar | CIViC evidence | DisGeNET entry | COSMIC occurrence |
Prediction | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | Entry | Origin | Annotation | |||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Size | Chromosome | Start | Stop | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | ||||||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Gene symbol | Chromosome | Genomic start | Genomic stop | Strand | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | |||||||||||||||
Exon
| Exon number | Start | Stop |
|---|---|---|
| 9 | 3,440,019 | 3,440,338 |
| 8 | 3,443,174 | 3,443,271 |
| 7 | 3,446,472 | 3,446,601 |
| 6 | 3,448,807 | 3,449,149 |
| 5 | 3,462,483 | 3,462,578 |
| 4 | 3,462,707 | 3,462,767 |
| 3 | 3,467,426 | 3,467,554 |
| 2 | 3,469,283 | 3,469,398 |
| 1 | 3,471,583 | 3,471,746 |
CDS
| Exon number | Type | Start | Stop |
|---|---|---|---|
| 9 | CDS | 3,440,147 | 3,440,338 |
| 8 | CDS | 3,443,174 | 3,443,271 |
| 7 | CDS | 3,446,472 | 3,446,601 |
| 6 | CDS | 3,448,807 | 3,449,149 |
| 5 | CDS | 3,462,483 | 3,462,578 |
| 4 | CDS | 3,462,707 | 3,462,767 |
| 3 | CDS | 3,467,426 | 3,467,554 |
| 2 | CDS | 3,469,283 | 3,469,325 |
Other genome
| Genome | Chromosome | Start | End | Links |
|---|---|---|---|---|
| hg19 | chr17 | 3,343,313 | 3,375,040 | Link |
CDS sequence
ATGAAGCGAAGCCTAAATGAAAATTCAGCTCGAAGTACAGCAGGCTGTTTGCCTGTTCCGTTGTTCAATCAGAAAAAGAGGAACAGACAGCCATTAACTTCTAATCCACTTAAAGATGATTCAGGTATCAGTACCCCTTCTGACAATTATGATTTTCCTCCTCTACCTACAGATTGGGCCTGGGAAGCTGTGAATCCAGAGTTGGCTCCTGTAATGAAAACAGTGGACACCGGGCAAATACCACATTCAGTTTCTCGTCCTCTGAGAAGTCAAGATTCTGTCTTTAACTCTATTCAATCAAATACTGGAAGAAGCCAGGGTGGTTGGAGCTACAGAGATGGTAACAAAAATACCAGCTTGAAAACTTGGAATAAAAATGATTTTAAGCCTCAATGTAAACGAACAAACTTAGTGGCAAATGATGGAAAAAATTCTTGTCCAGTGAGTTCGGGAGCTCAACAACAAAAACAATTAAGAATACCTGAACCTCCTAACTTATCTCGCAACAAAGAAACCGAGCTACTCAGACAAACACATTCATCAAAAATATCTGGCTGCACAATGAGAGGGCTAGACAAAAACAGTGCACTACAGACACTTAAGCCCAATTTTCAACAAAATCAATATAAGAAACAAATGTTGGATGATATTCCAGAAGACAACACCCTGAAGGAAACCTCATTGTATCAGTTACAGTTTAAGGAAAAAGCTAGTTCTTTAAGAATTATTTCTGCAGTTATTGAAAGCATGAAGTATTGGCGTGAACATGCACAGAAAACTGTACTTCTTTTTGAAGTATTAGCTGTTCTTGATTCAGCTGTTACACCTGGCCCATATTATTCGAAGACTTTTCTTATGAGGGATGGGAAAAATACTCTGCCTTGTGTCTTTTATGAAATCGATCGTGAACTTCCGAGACTGATTAGAGGCCGAGTTCATAGATGTGTTGGCAACTATGACCAGAAAAAGAACATTTTCCAATGTGTTTCTGTCAGACCGGCGTCTGTTTCTGAACAAAAAACTTTCCAGGCATTTGTCAAAATTGCAGATGTTGAGATGCAGTATTATATTAATGTGATGAATGAAACTTAA
Amino sequence
MKRSLNENSARSTAGCLPVPLFNQKKRNRQPLTSNPLKDDSGISTPSDNYDFPPLPTDWAWEAVNPELAPVMKTVDTGQIPHSVSRPLRSQDSVFNSIQSNTGRSQGGWSYRDGNKNTSLKTWNKNDFKPQCKRTNLVANDGKNSCPVSSGAQQQKQLRIPEPPNLSRNKETELLRQTHSSKISGCTMRGLDKNSALQTLKPNFQQNQYKKQMLDDIPEDNTLKETSLYQLQFKEKASSLRIISAVIESMKYWREHAQKTVLLFEVLAVLDSAVTPGPYYSKTFLMRDGKNTLPCVFYEIDRELPRLIRGRVHRCVGNYDQKKNIFQCVSVRPASVSEQKTFQAFVKIADVEMQYYINVMNET*