ENST00000269127.5 CHCT1

Information
Transcript ID
ENST00000269127.5
Genome
hg38
Position
chr17:60,422,489-60,431,426
Strand
+
CDS length
711
Amino acid length
237
Gene symbol
CHCT1
Gene type
protein-coding
Gene description
CHD1 helical C-terminal domain containing 1
Gene Entrez Gene ID
124773
Variants

Display target variant


Search Word
Target data :
MGeND data only
Category :
Search word :
Filtering :
Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
Search Word
Target data :
MGeND data only
Category :
Search word :
Filtering :
Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Search Word
Target data :
MGeND data only
Category :
Search word :
Filtering :
Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
1 60,422,489 60,422,643
2 60,425,783 60,425,884
3 60,426,161 60,426,336
4 60,426,718 60,426,817
5 60,429,362 60,429,557
6 60,431,181 60,431,426
CDS
Exon number Type Start Stop
1 CDS 60,422,593 60,422,643
2 CDS 60,425,783 60,425,884
3 CDS 60,426,161 60,426,336
4 CDS 60,426,718 60,426,817
5 CDS 60,429,362 60,429,557
6 CDS 60,431,181 60,431,266
Other genome
Genome Chromosome Start End Links
hg19 chr17 58,499,850 58,508,787 Link
CDS sequence
ATGGAGGCCTCAGATGGGCAAGGGGGTGAAGGGGACAAGCCACTAGAGCAGGTGACAAATGTGTCATGCCTGGAGACAAGCTCCAGCGCCAGCCCTGCTAGAGACTCGCTCATGCGCCATGCCAAGGGCCTGGATCAGGACACCTTCAAAACTTGTAAAGAATACCTAAGACCGCTGAAGAAGTTCCTGCGAAAGTTGCACCTGCCCAGGGACCTTCCCCAGAAGAAGAAGCTGAAGTACATGAAGCAGAGCCTTGTGGTCCTAGGGGACCACATCAACACCTTTCTGCAGCATTACTGCCAAGCCTGGGAAATCAAACACTGGAGAAAGATGCTCTGGCGGTTCATCTCCCTCTTCTCGGAGCTGGAAGCAAAGCAGCTTCGCCGACTTTACAAGTACACCAAGAGCAGCCAGCCGGCCAAGTTCCTGGTGACATTCTGCGCCTCGGATGCGCCGGAGAGGTCCTTGCTGGCCGACCGGGAAGACAGTCTGCCCAAGCTCTGCCATGCATGGGGGCTGCACAGCAACATCAGCGGCATGAAGGAGCGGCTGTCCAACATGCAGACCCCAGGTCAAGGGAGCCCCCTGCCTGGGCAGCCAAGATCCCAGGACCATGTCAAGAAAGATTCTTTAAGGGAGCTTTCTCAAAAACCAAAACTCAAGAGGAAGAGGATAAAGGAAGCCCCAGAAACTCCAGAGACTGAACCGTAA
Amino sequence
MEASDGQGGEGDKPLEQVTNVSCLETSSSASPARDSLMRHAKGLDQDTFKTCKEYLRPLKKFLRKLHLPRDLPQKKKLKYMKQSLVVLGDHINTFLQHYCQAWEIKHWRKMLWRFISLFSELEAKQLRRLYKYTKSSQPAKFLVTFCASDAPERSLLADREDSLPKLCHAWGLHSNISGMKERLSNMQTPGQGSPLPGQPRSQDHVKKDSLRELSQKPKLKRKRIKEAPETPETEP*