ENST00000600321.5 ZNF880
Information
- Transcript ID
- ENST00000600321.5
- Genome
- hg38
- Position
- chr19:52,369,936-52,380,075
- Strand
- +
- CDS length
- 378
- Amino acid length
- 126
- Gene symbol
- ZNF880
- Gene type
- protein-coding
- Gene description
- zinc finger protein 880
- Gene Entrez Gene ID
- 400713
Variants
Display target variant
Search Word
Target data | : |
MGeND data only
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Category | : |
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Filtering | : |
Variant name | Gene | AA change | CDS | Japanese frequency |
TogoVar | MGeND | Genome | ClinVar | CIViC evidence | DisGeNET entry | COSMIC occurrence |
Prediction | |||||
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Entry | Origin | Type | Annotation | Entry | Origin | Annotation |
Search Word
Target data | : |
MGeND data only
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Category | : |
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Search word | : | |
Filtering | : |
Name | MGeND | Type | Genome | Size | Chromosome | Start | Stop | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Entry | Origin | Type | Annotation |
Search Word
Target data | : |
MGeND data only
|
Category | : |
|
Search word | : | |
Filtering | : |
Name | MGeND | Type | Genome | Gene symbol | Chromosome | Genomic start | Genomic stop | Strand | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
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Entry | Origin | Type | Annotation |
Exon
Exon number | Start | Stop |
---|---|---|
1 | 52,369,936 | 52,369,977 |
2 | 52,373,111 | 52,373,237 |
3 | 52,374,299 | 52,374,427 |
4 | 52,379,421 | 52,380,075 |
CDS
Exon number | Type | Start | Stop |
---|---|---|---|
1 | CDS | 52,369,966 | 52,369,977 |
2 | CDS | 52,373,111 | 52,373,237 |
3 | CDS | 52,374,299 | 52,374,427 |
4 | CDS | 52,379,421 | 52,379,530 |
Other genome
Genome | Chromosome | Start | End | Links |
---|---|---|---|---|
hg19 | chr19 | 52,873,189 | 52,883,328 | Link |
CDS sequence
ATGCTGCGGCGTGGACACTTGGCATTCAGGGACGTGGCCATAGAATTCCCTCAGGAGGAGTGGAAATGTCTGGACCCTGCTCAGAGGACTTTATACAGGGAAGTGATGGTGGAGAACTACAGGAACCTGGTCTTTCTGGGAATCTGTCTTCCTGACCTGAGTGTTATCTCCATGTTGGAGCAAAGGAGAGATCCCCGGAATCTGCAGAGTGAAGTGAAAATAGCAAACAATCCAGGTGGCAGGGAGTGCATCAAAGGTGTGAACGCAGAGTCTCGCTCTGTCACCCAGGCTGGAGTGCAATGCCGCGATCTCGGCTCACTGCAACCTTCGCTTCCTGGATTCAAGCAATTCTTCTGCATCGGCCTCCCCAAGTGCTAG
Amino sequence
MLRRGHLAFRDVAIEFPQEEWKCLDPAQRTLYREVMVENYRNLVFLGICLPDLSVISMLEQRRDPRNLQSEVKIANNPGGRECIKGVNAESRSVTQAGVQCRDLGSLQPSLPGFKQFFCIGLPKC*