ENST00000543264.7 SHD
Information
- Transcript ID
- ENST00000543264.7
- Genome
- hg38
- Position
- chr19:4,279,266-4,290,722
- Strand
- +
- CDS length
- 1,023
- Amino acid length
- 341
- Gene symbol
- SHD
- Gene type
- protein-coding
- Gene description
- Src homology 2 domain containing transforming protein D
- Gene Entrez Gene ID
- 56961
Variants
Display target variant
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Variant name | Gene | AA change | CDS | Japanese frequency |
TogoVar | MGeND | Genome | ClinVar | CIViC evidence | DisGeNET entry | COSMIC occurrence |
Prediction | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | Entry | Origin | Annotation | |||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Size | Chromosome | Start | Stop | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | ||||||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Gene symbol | Chromosome | Genomic start | Genomic stop | Strand | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | |||||||||||||||
Exon
| Exon number | Start | Stop |
|---|---|---|
| 1 | 4,279,266 | 4,280,360 |
| 2 | 4,282,870 | 4,282,975 |
| 3 | 4,283,054 | 4,283,242 |
| 4 | 4,284,781 | 4,284,904 |
| 5 | 4,288,243 | 4,288,362 |
| 6 | 4,290,447 | 4,290,722 |
CDS
| Exon number | Type | Start | Stop |
|---|---|---|---|
| 1 | CDS | 4,280,064 | 4,280,360 |
| 2 | CDS | 4,282,870 | 4,282,975 |
| 3 | CDS | 4,283,054 | 4,283,242 |
| 4 | CDS | 4,284,781 | 4,284,904 |
| 5 | CDS | 4,288,243 | 4,288,362 |
| 6 | CDS | 4,290,447 | 4,290,633 |
Other genome
| Genome | Chromosome | Start | End | Links |
|---|---|---|---|---|
| hg19 | chr19 | 4,279,263 | 4,290,719 | Link |
CDS sequence
ATGGCCAAGTGGCTACGGGACTACCTGAGCTTTGGGGGTCGGAGGCCCCCTCCGCAGCCGCCCACCCCGGACTACACCGAGAGCGACATCCTGAGGGCCTACCGCGCGCAGAAGAACCTGGACTTCGAGGACCCCTATGAGGACGCGGAGAGCCGCTTGGAGCCGGACCCCGCGGGCCCTGGGGACTCCAAGAACCCCGGAGATGCCAAGTATGGTTCTCCCAAGCACCGGCTCATCAAGGTGGAGGCTGCGGATATGGCCAGAGCCAAGGCCCTTCTGGGCGGCCCCGGGGAGGAGCTGGAAGCCGACACTGAGTATTTAGACCCCTTTGATGCTCAGCCTCATCCTGCACCCCCGGATGATGGGTACATGGAGCCCTACGATGCCCAATGGGTCATGAGTGAACTTCCCGGCAGAGGGGTGCAGCTCTATGACACCCCTTATGAGGAACAGGACCCAGAGACAGCAGATGGACCCCCTTCTGGGCAGAAGCCTCGGCAGAGCCGGATGCCCCAGGAAGATGAACGGCCAGCAGATGAGTATGATCAGCCCTGGGAGTGGAAGAAAGACCACATCTCCAGGGCGTTTGCAGTGCAGTTTGACAGTCCAGAGTGGGAGAGGACTCCAGGCTCAGCCAAGGAGCTCCGGAGACCTCCGCCCAGAAGCCCCCAGCCTGCGGAGCGTGTGGACCCAGCCCTGCCCCTGGAGAAACAGCCGTGGTTTCATGGCCCCCTGAACAGGGCGGATGCAGAGAGCCTCCTGTCCCTCTGCAAGGAAGGCAGCTACCTAGTGCGGCTCAGTGAGACCAACCCCCAGGACTGCTCCTTGTCTCTCAGGAGCAGCCAGGGCTTCCTGCATCTGAAGTTCGCGCGGACCCGTGAGAACCAGGTGGTGCTGGGCCAACACAGCGGGCCCTTCCCCAGCGTGCCCGAGCTCGTCCTCCACTACAGTTCACGCCCACTGCCGGTGCAGGGTGCCGAGCATCTGGCTCTGCTGTACCCCGTGGTCACGCAGACCCCCTGA
Amino sequence
MAKWLRDYLSFGGRRPPPQPPTPDYTESDILRAYRAQKNLDFEDPYEDAESRLEPDPAGPGDSKNPGDAKYGSPKHRLIKVEAADMARAKALLGGPGEELEADTEYLDPFDAQPHPAPPDDGYMEPYDAQWVMSELPGRGVQLYDTPYEEQDPETADGPPSGQKPRQSRMPQEDERPADEYDQPWEWKKDHISRAFAVQFDSPEWERTPGSAKELRRPPPRSPQPAERVDPALPLEKQPWFHGPLNRADAESLLSLCKEGSYLVRLSETNPQDCSLSLRSSQGFLHLKFARTRENQVVLGQHSGPFPSVPELVLHYSSRPLPVQGAEHLALLYPVVTQTP*