ENST00000543897.5 ZCCHC8
Information
- Transcript ID
- ENST00000543897.5
- Genome
- hg38
- Position
- chr12:122,471,600-122,500,595
- Strand
- -
- CDS length
- 1,410
- Amino acid length
- 470
- Gene symbol
- ZCCHC8
- Gene type
- protein-coding
- Gene description
- zinc finger CCHC-type containing 8
- Gene Entrez Gene ID
- 55596
Variants
Display target variant
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
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| Search word | : | |
| Filtering | : |
| Variant name | Gene | AA change | CDS | Japanese frequency |
TogoVar | MGeND | Genome | ClinVar | CIViC evidence | DisGeNET entry | COSMIC occurrence |
Prediction | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | Entry | Origin | Annotation | |||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Size | Chromosome | Start | Stop | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | ||||||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Gene symbol | Chromosome | Genomic start | Genomic stop | Strand | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | |||||||||||||||
Exon
| Exon number | Start | Stop |
|---|---|---|
| 12 | 122,471,600 | 122,474,275 |
| 11 | 122,477,841 | 122,477,958 |
| 10 | 122,478,206 | 122,478,292 |
| 9 | 122,480,190 | 122,480,311 |
| 8 | 122,481,522 | 122,481,664 |
| 7 | 122,481,945 | 122,482,087 |
| 6 | 122,482,635 | 122,482,695 |
| 5 | 122,483,279 | 122,483,563 |
| 4 | 122,489,386 | 122,489,463 |
| 3 | 122,490,462 | 122,490,567 |
| 2 | 122,492,715 | 122,492,789 |
| 1 | 122,498,827 | 122,500,595 |
CDS
| Exon number | Type | Start | Stop |
|---|---|---|---|
| 12 | CDS | 122,473,497 | 122,474,275 |
| 11 | CDS | 122,477,841 | 122,477,958 |
| 10 | CDS | 122,478,206 | 122,478,292 |
| 9 | CDS | 122,480,190 | 122,480,311 |
| 8 | CDS | 122,481,522 | 122,481,664 |
| 7 | CDS | 122,481,945 | 122,482,087 |
| 6 | CDS | 122,482,635 | 122,482,652 |
Other genome
| Genome | Chromosome | Start | End | Links |
|---|---|---|---|---|
| hg19 | chr12 | 122,956,147 | 122,985,142 | Link |
CDS sequence
ATGAAAGATTGCCCAATGCCTCGGAATGCTGCTCGAATAAGTGAAAAGAGAAAAGAGTATATGGATGCCTGTGGAGAAGCAAACAATCAGAATTTCCAGCAGCGATACCACGCAGAAGAAGTAGAAGAAAGATTTGGAAGATTCAAGCCAGGAGTTATTAGTGAGGAACTTCAAGATGCACTAGGTGTGACAGACAAGAGTCTTCCACCTTTTATCTATCGGATGCGCCAGCTAGGGTACCCACCAGGGTGGCTCAAAGAGGCTGAATTGGAGAATTCGGGGCTTGCACTCTATGATGGAAAAGATGGCACTGATGGGGAAACAGAAGTTGGAGAAATACAACAGAATAAAAGTGTCACTTACGATCTCTCAAAATTGGTCAACTATCCTGGTTTTAATATATCTACTCCCAGAGGAATTCCAGACGAATGGAGGATCTTTGGTTCCATACCAATGCAGGCATGTCAGCAGAAGGATGTGTTTGCCAATTACCTTACTTCTAACTTCCAAGCGCCAGGTGTGAAGTCTGGCAACAAGAGGTCTTCATCTCACTCTAGCCCAGGTAGTCCAAAGAAGCAGAAGAATGAAAGCAACTCAGCGGGATCTCCCGCCGACATGGAGCTCGATTCAGATATGGAGGTACCACATGGTTCTCAGAGCAGCGAAAGTTTTCAGTTTCAACCACCATTACCTCCTGACACTCCTCCACTCCCCCGGGGAACTCCTCCACCCGTCTTCACCCCTCCACTCCCAAAGGGCACCCCGCCGCTGACTCCCAGTGACTCACCCCAGACCAGAACAGCATCTGGAGCTGTGGATGAGGACGCACTGACTCTAGAAGAACTTGAAGAACAGCAGAGGCGGATCTGGGCAGCTCTTGAGCAGGCCGAGAGCGTAAACAGCGACTCCGACGTTCCTGTGGACACACCTTTAACTGGCAATTCCGTTGCCTCATCACCTTGTCCAAATGAGCTAGACCTCCCTGTCCCGGAGGGAAAAACATCTGAAAAGCAGACGCTGGATGAGCCTGAGGTACCAGAGATTTTTACAAAGAAATCAGAAGCTGGACATGCCTCCAGTCCAGACTCTGAGGTGACATCACTTTGTCAGAAGGAAAAAGCAGAGTTGGCTCCGGTAAACACTGAAGGTGCCCTTCTTGATAATGGCAGTGTCGTACCAAACTGTGACATCAGCAATGGGGGCAGCCAGAAGCTCTTTCCTGCAGACACCAGTCCTTCAACGGCCACTAAAATTCATAGCCCTATACCTGACATGAGCAAATTTGCAACTGGAATCACGCCATTTGAATTTGAGAATATGGCAGAATCTACTGGAATGTACCTCAGGATAAGAAGCTTGTTAAAGAACTCACCCCGAAACCAGCAGAAAAACAAAAAGGCCTCTGAATAA
Amino sequence
MKDCPMPRNAARISEKRKEYMDACGEANNQNFQQRYHAEEVEERFGRFKPGVISEELQDALGVTDKSLPPFIYRMRQLGYPPGWLKEAELENSGLALYDGKDGTDGETEVGEIQQNKSVTYDLSKLVNYPGFNISTPRGIPDEWRIFGSIPMQACQQKDVFANYLTSNFQAPGVKSGNKRSSSHSSPGSPKKQKNESNSAGSPADMELDSDMEVPHGSQSSESFQFQPPLPPDTPPLPRGTPPPVFTPPLPKGTPPLTPSDSPQTRTASGAVDEDALTLEELEEQQRRIWAALEQAESVNSDSDVPVDTPLTGNSVASSPCPNELDLPVPEGKTSEKQTLDEPEVPEIFTKKSEAGHASSPDSEVTSLCQKEKAELAPVNTEGALLDNGSVVPNCDISNGGSQKLFPADTSPSTATKIHSPIPDMSKFATGITPFEFENMAESTGMYLRIRSLLKNSPRNQQKNKKASE*